CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71031	Soybean	nucleus	92.18	92.01
VIT_01s0010g00740.t01	Wine grape	nucleus	54.18	63.54
Solyc05g010610.2.1	Tomato	nucleus	51.09	54.35
PGSC0003DMT400050585	Potato	nucleus	50.36	53.27
Bra038336.1-P	Field mustard	plastid	33.82	50.96
PGSC0003DMT400004830	Potato	nucleus	40.55	48.16
AT1G68920.1	Thale cress	nucleus	42.55	48.15
CDY45835	Canola	nucleus	39.64	48.12
PGSC0003DMT400022704	Potato	nucleus	46.55	47.85
CDY33568	Canola	nucleus	41.45	47.3
Bra004348.1-P	Field mustard	nucleus	40.36	46.64
CDX95974	Canola	nucleus	40.55	46.56
Solyc01g010130.2.1	Tomato	nucleus	45.27	46.37
CDX81575	Canola	nucleus	39.82	46.11
GSMUA_Achr6P36210_001	Banana	nucleus	22.91	45.82
Solyc04g005220.1.1	Tomato	nucleus	34.55	45.35
Os09t0474100-01	Rice	nucleus	34.55	44.39
Zm00001d020826_P001	Maize	nucleus	33.82	42.86
KXG35834	Sorghum	nucleus	34.0	42.79
Os06t0275600-01	Rice	cytosol, nucleus	34.0	42.79
TraesCS5D01G258300.1	Wheat	nucleus	32.91	42.69
TraesCS5A01G250600.1	Wheat	nucleus	32.91	42.59
TraesCS5B01G248600.1	Wheat	nucleus	32.73	42.45
GSMUA_Achr8P24490_001	Banana	nucleus	31.09	41.3
Zm00001d005964_P002	Maize	nucleus	32.36	39.29
KRH69414	Soybean	nucleus	18.18	39.22
KRH56987	Soybean	plastid	15.82	38.84
KRH45811	Soybean	nucleus	19.09	38.46
KRH03393	Soybean	nucleus	16.0	38.43
KRH74729	Soybean	nucleus	18.36	38.26
KRH69415	Soybean	nucleus	17.82	37.69
GSMUA_Achr9P28060_001	Banana	nucleus	20.55	36.93
KRH63442	Soybean	nucleus	16.18	36.63
KRH52141	Soybean	nucleus	19.82	36.45
KRH61450	Soybean	nucleus	24.55	35.9
GSMUA_Achr9P18510_001	Banana	nucleus	20.0	35.26
KRH15460	Soybean	nucleus	27.09	34.73
KRG88634	Soybean	nucleus, plastid	27.09	34.25
KRH54478	Soybean	nucleus	16.73	34.2
OQU81018	Sorghum	nucleus	22.36	32.8
GSMUA_Achr3P10600_001	Banana	nucleus	26.91	32.1
KRH54121	Soybean	nucleus	20.18	31.81
KRH63842	Soybean	nucleus	20.0	31.79
KRH41084	Soybean	nucleus	18.91	30.68
TraesCS7A01G211900.1	Wheat	nucleus	24.18	30.23
TraesCS7B01G118800.1	Wheat	nucleus	24.0	30.0
TraesCS7D01G213500.1	Wheat	nucleus	24.0	30.0
KRH59766	Soybean	nucleus	18.55	29.82
KRG95332	Soybean	nucleus	19.82	29.78
HORVU0Hr1G020200.1	Barley	nucleus	23.82	29.77
KRH24463	Soybean	nucleus	21.82	29.7
KRH33022	Soybean	nucleus	19.27	29.69
KRH71879	Soybean	nucleus	19.09	29.66
KRH29448	Soybean	nucleus	22.36	29.22
Os08t0487700-00	Rice	nucleus	17.82	28.57
KRH51523	Soybean	nucleus	20.18	28.46
KRG99606	Soybean	nucleus	29.27	27.76
KRH66158	Soybean	nucleus, plastid	29.82	27.61
KRH07417	Soybean	nucleus, plastid	29.45	27.5
KRH46615	Soybean	nucleus	29.09	27.3
KRH67006	Soybean	nucleus	19.82	27.25
KRH60839	Soybean	nucleus	20.73	26.51

Protein Annotations

EntrezGene:100797720	MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EMBL:ACUP02000148	EnsemblPlantsGene:GLYMA_01G068600
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	UniProt:K7K2A6	EnsemblPlants:KRH75189	ProteinID:KRH75189	ProteinID:KRH75189.1	PFAM:PF00010
PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF184	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI0001FBD992
InterPro:bHLH_dom	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:11500572..11504253

Molecular Weight (calculated)

59016.7 Da

IEP (calculated)

5.343

GRAVY (calculated)

-0.632

Length

550 amino acids

Sequence
(BLAST)

001: MGDKEKFELD RNEDPMSYSS GMHSDWRFGG ANIASSSVAM VGLGNSMNVS RGDLIGSSSC SSASMVDSFG PNYWENPTCS QNLGFCDINV HNNGGSSSTV
101: AIRKDGFGFG RAGQDHHETL EMGWNPANSI LSNGPGMFPH TLSQFPTDSG FIERAARFSC FSGGNFSDMV NSYGIAQSMG LYGARDAIAG HGMKSVTGGQ
201: SQGGDMNVVE ATKDVSPSVE HLVAAKGSPL KSDRRSEGHV ISQDEGKQSL VRPANESDRA ESSDDGGGQD DSPMLEGTSG EPSSKGLNTK KRKRSGQDGD
301: NDKANGAQEL PSEGAEDNYE NQQKGDHQPT STAKASGKNA KLGSQASDPP KEEYIHVRAR RGQATNSHSL AERVRREKIS ERMKFLQDLV PGCSKVTGKA
401: VMLDEIINYV QSLQRQVEFL SMKLATVNPR LDFNIEGLLA KDILQQRPGP SSALGFPLDM SMAFPPLHPP QPGLIHPVIP NMANSSDILQ RTIHPQLAPL
501: NGGLKEPNQL PDVWEDELHN VVQMSFATTA PLTSQDFDGT GPASQMKVEL

Best Arabidopsis Sequence Match ( AT1G68920.3 )
(BLAST)

001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP

Arabidopsis Description

BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.