Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G118800.1 | Wheat | nucleus | 97.73 | 97.73 |
| TraesCS7D01G213500.1 | Wheat | nucleus | 97.5 | 97.5 |
| TraesCS7A01G211900.1 | Wheat | nucleus | 96.82 | 96.82 |
| HORVU5Hr1G107520.2 | Barley | cytosol, nucleus | 17.95 | 38.16 |
| HORVU4Hr1G009970.28 | Barley | nucleus | 22.95 | 31.27 |
| Os06t0275600-01 | Rice | cytosol, nucleus | 30.68 | 30.89 |
| Bra038336.1-P | Field mustard | plastid | 24.32 | 29.32 |
| HORVU7Hr1G055180.4 | Barley | nucleus, plastid | 18.64 | 27.89 |
| VIT_01s0010g00740.t01 | Wine grape | nucleus | 29.09 | 27.29 |
| HORVU5Hr1G077390.1 | Barley | nucleus | 17.27 | 27.24 |
| HORVU7Hr1G094690.1 | Barley | plastid | 15.0 | 26.72 |
| HORVU7Hr1G052870.23 | Barley | nucleus | 22.95 | 25.7 |
| HORVU6Hr1G068980.2 | Barley | nucleus | 21.59 | 24.61 |
| CDY45835 | Canola | nucleus | 25.23 | 24.5 |
| Solyc05g010610.2.1 | Tomato | nucleus | 28.64 | 24.37 |
| Bra004348.1-P | Field mustard | nucleus | 26.14 | 24.16 |
| CDY33568 | Canola | nucleus | 26.36 | 24.07 |
| KRH71031 | Soybean | nucleus | 30.0 | 23.96 |
| PGSC0003DMT400050585 | Potato | nucleus | 28.18 | 23.85 |
| KRH75189 | Soybean | nucleus | 29.77 | 23.82 |
| CDX95974 | Canola | nucleus | 25.91 | 23.8 |
| PGSC0003DMT400004830 | Potato | nucleus | 25.0 | 23.76 |
| AT1G68920.1 | Thale cress | nucleus | 26.14 | 23.66 |
| Solyc01g010130.2.1 | Tomato | nucleus | 28.86 | 23.65 |
| CDX81575 | Canola | nucleus | 25.45 | 23.58 |
| PGSC0003DMT400022704 | Potato | nucleus | 28.64 | 23.55 |
| HORVU5Hr1G075430.5 | Barley | nucleus, plastid | 22.27 | 23.0 |
| Solyc04g005220.1.1 | Tomato | nucleus | 18.86 | 19.81 |
| HORVU3Hr1G093310.2 | Barley | nucleus, plasma membrane, plastid | 25.0 | 17.3 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G020200.1 | EnsemblPlantsGene:HORVU0Hr1G020200 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF182 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0002961A06 | UniProt:M0Y3B4 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : | : |
Description
No Description!
Coordinates
chrchrUn:+:105978928..105981062
Molecular Weight (calculated)
47548.4 Da
IEP (calculated)
5.753
GRAVY (calculated)
-0.699
Length
440 amino acids
Sequence
(BLAST)
(BLAST)
001: METNEKNAAE LEEKNQPSGH DQQPSFHGPG FSLSPEAQMD SSTSALAAMG NPFPPGLWNP PGQNFGLGEA NTNAMLNGHQ FSSFLGMLSA ATPAYPGAPS
101: GFMDCGTGFP GLSANSLGAM MDHPFSRNPP MGSFQNDIET SREMNVDEGC KDALLTGDRQ QGDTESSHGV DASSKELSKP ECSGGAGQDE GPSVSCPKKR
201: KRPSQDRGVK NVQEGSQQLA TLAAKQEKDD GDKDEPKRPI VTSRKSNGKQ TEDKSDAPKE DYIHIRARSG QATNSHSLAE RVRREKISER MKFLQDLVPG
301: CSKVIGKAVM LDEIINYVQS LQRQVEFLSM KLSAVNPALD FNIERILSKD LFQSQGTASS TFGFLPDIGH QFLHPPKHSQ AALHSIVNPA DAFGRVTNAP
401: VGCTFKEATH QVPNNFDGEF HNVIGMPFTL FNDQESNGKP
101: GFMDCGTGFP GLSANSLGAM MDHPFSRNPP MGSFQNDIET SREMNVDEGC KDALLTGDRQ QGDTESSHGV DASSKELSKP ECSGGAGQDE GPSVSCPKKR
201: KRPSQDRGVK NVQEGSQQLA TLAAKQEKDD GDKDEPKRPI VTSRKSNGKQ TEDKSDAPKE DYIHIRARSG QATNSHSLAE RVRREKISER MKFLQDLVPG
301: CSKVIGKAVM LDEIINYVQS LQRQVEFLSM KLSAVNPALD FNIERILSKD LFQSQGTASS TFGFLPDIGH QFLHPPKHSQ AALHSIVNPA DAFGRVTNAP
401: VGCTFKEATH QVPNNFDGEF HNVIGMPFTL FNDQESNGKP
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQKNSEAAQ SHRSQQSEEE PDNNGDEKRN DEQSPNSPGK KSNSGKQQGK QSSDPPKDGY
301: IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFN LEGLLAKDAL QLRAGSSSTT
401: PFPPNMSMAY PPLPHGFMQQ TLSSIGRTIT SPLSPMNGGF KRQETNGWEG DLQNVIHINY GAGDVTPDPQ AAATASLPAA NMKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQKNSEAAQ SHRSQQSEEE PDNNGDEKRN DEQSPNSPGK KSNSGKQQGK QSSDPPKDGY
301: IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFN LEGLLAKDAL QLRAGSSSTT
401: PFPPNMSMAY PPLPHGFMQQ TLSSIGRTIT SPLSPMNGGF KRQETNGWEG DLQNVIHINY GAGDVTPDPQ AAATASLPAA NMKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.