CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75189	Soybean	nucleus	92.01	92.18
VIT_01s0010g00740.t01	Wine grape	nucleus	53.18	62.47
Solyc05g010610.2.1	Tomato	nucleus	50.82	54.16
PGSC0003DMT400050585	Potato	nucleus	50.09	53.08
Bra038336.1-P	Field mustard	plastid	33.58	50.68
PGSC0003DMT400004830	Potato	nucleus	40.83	48.6
AT1G68920.1	Thale cress	nucleus	42.11	47.74
CDY45835	Canola	nucleus	39.2	47.68
CDY33568	Canola	nucleus	41.56	47.51
PGSC0003DMT400022704	Potato	nucleus	46.1	47.48
Bra004348.1-P	Field mustard	nucleus	40.29	46.64
CDX95974	Canola	nucleus	40.29	46.35
Solyc01g010130.2.1	Tomato	nucleus	45.01	46.18
Solyc04g005220.1.1	Tomato	nucleus	35.03	46.06
CDX81575	Canola	nucleus	39.2	45.47
GSMUA_Achr6P36210_001	Banana	nucleus	22.5	45.09
Os09t0474100-01	Rice	nucleus	33.94	43.69
Zm00001d020826_P001	Maize	nucleus	33.58	42.63
KXG35834	Sorghum	nucleus	33.58	42.33
TraesCS5D01G258300.1	Wheat	nucleus	32.3	41.98
TraesCS5A01G250600.1	Wheat	nucleus	32.3	41.88
TraesCS5B01G248600.1	Wheat	nucleus	32.12	41.75
Os06t0275600-01	Rice	cytosol, nucleus	32.12	40.5
GSMUA_Achr8P24490_001	Banana	nucleus	30.13	40.1
Zm00001d005964_P002	Maize	nucleus	31.94	38.85
KRH69414	Soybean	nucleus	17.79	38.43
KRH03393	Soybean	nucleus	15.79	37.99
KRH56987	Soybean	plastid	15.43	37.95
KRH74729	Soybean	nucleus	17.97	37.5
KRH45811	Soybean	nucleus	18.51	37.36
KRH69415	Soybean	nucleus	17.42	36.92
GSMUA_Achr9P28060_001	Banana	nucleus	19.96	35.95
KRH52141	Soybean	nucleus	19.24	35.45
KRH63442	Soybean	nucleus	15.24	34.57
GSMUA_Achr9P18510_001	Banana	nucleus	19.42	34.29
KRH61450	Soybean	nucleus	23.05	33.78
KRH15460	Soybean	nucleus	25.77	33.1
KRG88634	Soybean	nucleus, plastid	25.77	32.64
KRH54478	Soybean	nucleus	15.79	32.34
OQU81018	Sorghum	nucleus	21.96	32.27
GSMUA_Achr3P10600_001	Banana	nucleus	26.5	31.67
KRH63842	Soybean	nucleus	19.78	31.5
KRH54121	Soybean	nucleus	19.6	30.95
KRH41084	Soybean	nucleus	18.87	30.68
TraesCS7A01G211900.1	Wheat	nucleus	24.32	30.45
TraesCS7D01G213500.1	Wheat	nucleus	24.14	30.23
TraesCS7B01G118800.1	Wheat	nucleus	24.14	30.23
HORVU0Hr1G020200.1	Barley	nucleus	23.96	30.0
KRG95332	Soybean	nucleus	19.6	29.51
KRH24463	Soybean	nucleus	21.6	29.46
Os08t0487700-00	Rice	nucleus	18.33	29.45
KRH59766	Soybean	nucleus	18.15	29.24
KRH33022	Soybean	nucleus	18.87	29.13
KRH71879	Soybean	nucleus	18.69	29.1
KRH29448	Soybean	nucleus	22.14	28.98
KRH51523	Soybean	nucleus	20.33	28.72
KRH66158	Soybean	nucleus, plastid	29.76	27.61
KRH07417	Soybean	nucleus, plastid	29.4	27.5
KRG99606	Soybean	nucleus	28.68	27.24
KRH46615	Soybean	nucleus	28.49	26.79
KRH67006	Soybean	nucleus	19.42	26.75
KRH60839	Soybean	nucleus	20.87	26.74

Protein Annotations

EntrezGene:100783810	MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EMBL:ACUP02000842	EnsemblPlantsGene:GLYMA_02G125200
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	UniProt:I1JEM4
InterPro:IPR011598	InterPro:IPR036638	ProteinID:KRH71030.1	EnsemblPlants:KRH71031	ProteinID:KRH71031	ProteinID:KRH71031.1
ProteinID:KRH71032.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF184	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0002337A9D	InterPro:bHLH_dom	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:12508796..12512425

Molecular Weight (calculated)

59266.1 Da

IEP (calculated)

5.975

GRAVY (calculated)

-0.635

Length

551 amino acids

Sequence
(BLAST)

001: MSDKEKFEVD RNEDHVSYSS GMHSDWRFGG SNLANSSVGF VGLGNNSMNV SRGDLIGSSS CSSASMVDSL SPNYWENPTS SQKLGFCDIN NVHNNGGSSS
101: TVAIRKDGFG FGRVGQDHHG TLEMGWNHAN SMLPNGPVMF PHSLSQFPTD SGFIERAARF SCFSGGNFGD MVNSYGIAQS MGLYGARDAI AGHGLKSVIA
201: GGQSQGGDMN VVEDVPPSVE HLVAAKGSPL KSDRRSEGHV IFQDEGKQSL VRNANESDRA ESSDDGGGQD DSPMLEGTSG EPSSKGLNSK KRKRSGRDGD
301: NDKANGAQEL PSEGAKGNSE NQQKGDQQPI STANKACGKN AKLGSQASDP PKEEYIHVRA RRGQATNSHS LAERVRREKI SERMKFLQDL VPGCSKVTGK
401: AVMLDEIINY VQSLQRQVEF LSMKLATVNP RLDFNIEGLL AKDILQQRPD PSTALGFPLD MSMAFPPLHP PQPGLIHPVI PNMTNSSDIL QRTIHPQLAP
501: LNGGFKEPNQ LPDVWEDELH NVVQMSFATT APPTSQDVDG TGPASQMKVE L

Best Arabidopsis Sequence Match ( AT1G68920.3 )
(BLAST)

001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP

Arabidopsis Description

BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.