Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- cytosol 1
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU81018 | Sorghum | nucleus | 42.57 | 38.93 |
| Os07t0193800-01 | Rice | endoplasmic reticulum | 18.08 | 29.81 |
| GSMUA_Achr6P36210_001 | Banana | nucleus | 23.03 | 28.73 |
| Os03t0728900-00 | Rice | cytosol, nucleus | 20.99 | 26.67 |
| Os06t0613500-01 | Rice | cytosol, nucleus | 13.12 | 25.28 |
| Os09t0474100-01 | Rice | nucleus | 31.2 | 25.0 |
| Os03t0802900-01 | Rice | nucleus | 18.95 | 24.53 |
| Os04t0350700-01 | Rice | nucleus | 18.66 | 24.33 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 21.28 | 23.86 |
| GSMUA_Achr8P24490_001 | Banana | nucleus | 26.53 | 21.98 |
| Bra038336.1-P | Field mustard | plastid | 22.16 | 20.82 |
| Os09t0501600-01 | Rice | nucleus | 22.16 | 20.77 |
| GSMUA_Achr9P18510_001 | Banana | nucleus | 18.66 | 20.51 |
| Os06t0275600-01 | Rice | cytosol, nucleus | 25.66 | 20.14 |
| Os11t0442500-00 | Rice | nucleus | 21.57 | 19.73 |
| Os02t0705500-01 | Rice | nucleus | 20.7 | 19.67 |
| VIT_01s0010g00740.t01 | Wine grape | nucleus | 26.82 | 19.62 |
| Os09t0510500-01 | Rice | nucleus | 15.74 | 19.15 |
| GSMUA_Achr3P10600_001 | Banana | nucleus | 25.66 | 19.09 |
| Os08t0524800-01 | Rice | nucleus | 22.45 | 19.01 |
| KRH71031 | Soybean | nucleus | 29.45 | 18.33 |
| Os08t0536800-01 | Rice | cytosol, nucleus, plastid | 16.33 | 18.12 |
| Solyc05g010610.2.1 | Tomato | nucleus | 27.11 | 17.99 |
| PGSC0003DMT400050585 | Potato | nucleus | 27.11 | 17.88 |
| KRH75189 | Soybean | nucleus | 28.57 | 17.82 |
| Os05t0103000-01 | Rice | nucleus | 17.49 | 17.7 |
| AT1G68920.1 | Thale cress | nucleus | 25.07 | 17.7 |
| CDY45835 | Canola | nucleus | 23.32 | 17.66 |
| CDX81575 | Canola | nucleus | 24.2 | 17.47 |
| CDX95974 | Canola | nucleus | 24.2 | 17.33 |
| Os01t0915600-01 | Rice | nucleus | 24.2 | 17.26 |
| Bra004348.1-P | Field mustard | nucleus | 23.62 | 17.02 |
| CDY33568 | Canola | nucleus | 23.91 | 17.01 |
| PGSC0003DMT400004830 | Potato | nucleus | 22.74 | 16.85 |
| PGSC0003DMT400022704 | Potato | nucleus | 25.95 | 16.64 |
| Solyc01g010130.2.1 | Tomato | nucleus | 25.36 | 16.2 |
| Solyc04g005220.1.1 | Tomato | nucleus | 16.33 | 13.37 |
| Os09t0474051-01 | Rice | plastid | 14.58 | 8.55 |
Protein Annotations
| EnsemblPlants:Os08t0487700-00 | EnsemblPlantsGene:Os08g0487700 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046983 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF182 |
| ProteinID:BAT05996.1 | SEG:seg | UniParc:UPI0003939157 | UniProt:A0A0P0XHK4 | MapMan:15.5.32 | : |
Description
basic helix-loop-helix protein 087Helix-loop-helix DNA-binding domain containing protein. (Os08t0487700-00)
Coordinates
chr8:+:24121898..24123906
Molecular Weight (calculated)
35841.9 Da
IEP (calculated)
5.855
GRAVY (calculated)
-0.445
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MDANGGNGFG VESNASAVHG GMAMAWQWHG GQMSGGSSCA AAPPPVQQPA MDSLAWSSTV SPSTGAATAA SGAGFLLPPA AVRGGFGSFP VNSGGIVEPA
101: GDCSSESKKR RSDEIAGTDH ANASNALADS GNETECSKDV NGEVIGPPAT AAAGGKSKGK GAKDAGEAQK EGYSHVRARK GQATNNHSLA ERVTGKALML
201: DEIINYVQSL QRQVEFLSMK LSAVNPRIDL DIESLVNNSK DVLRFPGQPS SAPMGFSFST EMMPGLQLSR PGILQGGVHG MINPDVFTSL MQKQQQNDKG
301: AFREPQMHQT LDGSFRNTAQ MPYPQVMSSE ELSIRQDQDG FHM
101: GDCSSESKKR RSDEIAGTDH ANASNALADS GNETECSKDV NGEVIGPPAT AAAGGKSKGK GAKDAGEAQK EGYSHVRARK GQATNNHSLA ERVTGKALML
201: DEIINYVQSL QRQVEFLSMK LSAVNPRIDL DIESLVNNSK DVLRFPGQPS SAPMGFSFST EMMPGLQLSR PGILQGGVHG MINPDVFTSL MQKQQQNDKG
301: AFREPQMHQT LDGSFRNTAQ MPYPQVMSSE ELSIRQDQDG FHM
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQKNSEAAQ SHRSQQSEEE PDNNGDEKRN DEQSPNSPGK KSNSGKQQGK QSSDPPKDGY
301: IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFN LEGLLAKDAL QLRAGSSSTT
401: PFPPNMSMAY PPLPHGFMQQ TLSSIGRTIT SPLSPMNGGF KRQETNGWEG DLQNVIHINY GAGDVTPDPQ AAATASLPAA NMKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQKNSEAAQ SHRSQQSEEE PDNNGDEKRN DEQSPNSPGK KSNSGKQQGK QSSDPPKDGY
301: IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFN LEGLLAKDAL QLRAGSSSTT
401: PFPPNMSMAY PPLPHGFMQQ TLSSIGRTIT SPLSPMNGGF KRQETNGWEG DLQNVIHINY GAGDVTPDPQ AAATASLPAA NMKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.