Factsheet for Os05t0103000-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P16480_001	Banana	nucleus	25.96	53.66
GSMUA_Achr10P...	Banana	nucleus	26.25	48.37
PGSC0003DMT400069568	Potato	nucleus	33.33	39.79
Solyc06g072520.1.1	Tomato	nucleus, plastid	33.63	39.45
Solyc03g097820.1.1	Tomato	nucleus	34.22	35.15
Os07t0193800-01	Rice	endoplasmic reticulum	21.53	35.1
PGSC0003DMT400051137	Potato	nucleus	34.81	34.91
VIT_17s0000g00430.t01	Wine grape	nucleus	33.63	32.66
Os09t0510500-01	Rice	nucleus	27.14	32.62
Os06t0613500-01	Rice	cytosol, nucleus	16.52	31.46
Os08t0536800-01	Rice	cytosol, nucleus, plastid	28.32	31.07
KRH54121	Soybean	nucleus	31.86	30.95
KRH63842	Soybean	nucleus	30.97	30.35
Os03t0802900-01	Rice	nucleus	22.42	28.68
KRH41084	Soybean	nucleus	28.61	28.61
Os04t0350700-01	Rice	nucleus	22.12	28.52
VIT_01s0244g00010.t01	Wine grape	nucleus	22.42	28.15
KRH59766	Soybean	nucleus	28.02	27.78
Os03t0728900-00	Rice	cytosol, nucleus	21.53	27.04
Os09t0501600-01	Rice	nucleus	26.25	24.32
Os11t0442500-00	Rice	nucleus	25.37	22.93
Os02t0705500-01	Rice	nucleus	22.42	21.05
Os08t0524800-01	Rice	nucleus	24.48	20.49
Os09t0474100-01	Rice	nucleus	25.66	20.33
Os06t0275600-01	Rice	cytosol, nucleus	25.96	20.14
Os08t0487700-00	Rice	nucleus	17.7	17.49
Os01t0915600-01	Rice	nucleus	24.19	17.05
Os09t0474051-01	Rice	plastid	10.03	5.81

Protein Annotations

MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EntrezGene:4337537	ProteinID:AAS88824.2	ProteinID:AAW56931.1
EMBL:AK065864	ProteinID:BAF16304.1	ProteinID:BAS91843.1	ProteinID:EEE62005.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0046983
InterPro:HLH_DNA-bd_sf	EMBL:HQ858853	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlantsGene:Os05g0103000	EnsemblPlants:Os05t0103000-01
PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF182	UniProt:Q75M33	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI00004BA938	RefSeq:XP_015640731.1	RefSeq:XP_015640732.1	RefSeq:XP_015640733.1	RefSeq:XP_015640734.1
RefSeq:XP_015640735.1	InterPro:bHLH_dom	SEG:seg	:	:	:

Description

basic helix-loop-helix protein 083Similar to MYC1. (Os05t0103000-01)

Coordinates

chr5:-:178860..181534

Molecular Weight (calculated)

36832.1 Da

IEP (calculated)

6.502

GRAVY (calculated)

-0.366

Length

339 amino acids

Sequence
(BLAST)

001: MESLCGQLEH EHEQQLHQSS SSSLLPYCFL SAPEPLPVPG FPAGCSNLEE KAAAAMAAYE YESSSCSSLD PTSMPMVYSP IVLQPQECPL SFVFDNAAAA
101: AGDNKWVPGI QGSCPCSLGS TQDMDASWGK SRKHKRSNVG LKGLEEKKAR RVVLHQHDDD VKKKAKEAAG GEPPAGYIHV RARRGQATDS HSLAERVRRE
201: KISERMKMLQ SLVPGCDKVT GKALMLDEII SYVQSLQNQV EFLSMKLASL SPLMYEFGPG IDMHPDVLRQ LAKMPHEMVQ CMGQMGSTGI SLQGLGGGPT
301: GFAQDGSSHI NMVVMQVGEQ GQQQGSLHQV EMSSHCFFH

Best Arabidopsis Sequence Match ( AT5G50915.3 )
(BLAST)

001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQVFHFFL

Arabidopsis Description

BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.