Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH63842 | Soybean | nucleus | 59.89 | 60.4 |
| KRH54121 | Soybean | nucleus | 59.31 | 59.31 |
| Solyc06g072520.1.1 | Tomato | nucleus, plastid | 47.85 | 57.79 |
| PGSC0003DMT400069568 | Potato | nucleus | 46.42 | 57.04 |
| Solyc03g097820.1.1 | Tomato | nucleus | 52.72 | 55.76 |
| KRH41084 | Soybean | nucleus | 54.15 | 55.75 |
| PGSC0003DMT400051137 | Potato | nucleus | 53.87 | 55.62 |
| KRH59766 | Soybean | nucleus | 53.01 | 54.09 |
| EES14175 | Sorghum | nucleus | 39.83 | 47.44 |
| HORVU7Hr1G055180.4 | Barley | nucleus, plastid | 38.4 | 45.58 |
| GSMUA_Achr5P24960_001 | Banana | nucleus | 23.5 | 44.57 |
| EER99171 | Sorghum | nucleus | 35.82 | 44.48 |
| Os09t0510500-01 | Rice | nucleus | 35.53 | 43.97 |
| TraesCS5D01G300100.1 | Wheat | nucleus | 33.81 | 42.75 |
| TraesCS5B01G292100.1 | Wheat | nucleus | 33.52 | 42.39 |
| TraesCS5A01G292900.1 | Wheat | nucleus | 34.1 | 42.35 |
| HORVU5Hr1G077390.1 | Barley | nucleus | 33.81 | 42.29 |
| Zm00001d031665_P001 | Maize | mitochondrion | 38.11 | 42.22 |
| Zm00001d021086_P001 | Maize | nucleus, plastid | 34.1 | 41.46 |
| Os08t0536800-01 | Rice | cytosol, nucleus, plastid | 36.68 | 41.42 |
| TraesCS7A01G263700.1 | Wheat | nucleus | 36.39 | 40.97 |
| TraesCS7D01G264600.3 | Wheat | nucleus | 39.26 | 40.9 |
| TraesCS7B01G161700.3 | Wheat | nucleus, plastid | 38.97 | 40.6 |
| Zm00001d049870_P001 | Maize | nucleus | 35.53 | 38.87 |
| AT5G50915.2 | Thale cress | nucleus | 31.81 | 38.81 |
| CDY45806 | Canola | nucleus | 32.38 | 38.57 |
| CDX84885 | Canola | nucleus | 32.66 | 38.38 |
| Bra022753.1-P | Field mustard | nucleus | 32.38 | 38.05 |
| Zm00001d006110_P002 | Maize | nucleus, plastid | 34.96 | 38.01 |
| VIT_01s0244g00010.t01 | Wine grape | nucleus | 28.08 | 36.3 |
| Os05t0103000-01 | Rice | nucleus | 32.66 | 33.63 |
| VIT_17s0000g05370.t01 | Wine grape | nucleus | 26.36 | 32.39 |
| VIT_01s0026g01140.t01 | Wine grape | nucleus | 25.21 | 31.77 |
| VIT_04s0023g01930.t01 | Wine grape | nucleus | 26.93 | 25.68 |
| VIT_18s0001g08600.t01 | Wine grape | nucleus | 31.23 | 25.35 |
| VIT_08s0007g07870.t01 | Wine grape | nucleus | 26.07 | 25.0 |
| VIT_07s0151g00450.t01 | Wine grape | nucleus | 28.37 | 23.86 |
| VIT_03s0038g04760.t01 | Wine grape | nucleus | 28.94 | 22.3 |
| VIT_01s0010g00740.t01 | Wine grape | nucleus | 28.94 | 21.54 |
| VIT_05s0029g00390.t01 | Wine grape | nucleus | 30.66 | 19.67 |
Protein Annotations
| EntrezGene:100268131 | wikigene:100268131 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | ProteinID:CBI15739 |
| ProteinID:CBI15739.3 | ncoils:Coil | UniProt:D7SH59 | EMBL:FN594950 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EntrezGene:LOC100268131 |
| wikigene:LOC100268131 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | SMART:SM00353 |
| SUPFAM:SSF47459 | TIGR:TC53625 | UniParc:UPI0001984F72 | ArrayExpress:VIT_17s0000g00430 | EnsemblPlantsGene:VIT_17s0000g00430 | EnsemblPlants:VIT_17s0000g00430.t01 |
| unigene:Vvi.587 | RefSeq:XP_002284464 | RefSeq:XP_002284464.1 | InterPro:bHLH_dom | SEG:seg | : |
Description
No Description!
Coordinates
chr17:+:299665..302242
Molecular Weight (calculated)
38750.7 Da
IEP (calculated)
6.874
GRAVY (calculated)
-0.574
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAFSYQHPP FLLDSVFLPS TPIKMSGFME EGNTTTCFSQ FFPSESLHEV PADARVHEST SLQHSSKVTL SDNEPCVTQK LSTDSSSVVD RLELGEQVTQ
101: KVAPIERERK RKSRDGSSLT SAQSKDAREG KGKKAKKGSG LVKDGEEEQL KADKKDQKKA SEEPPTGYIH VRARRGQATD SHSLAERVRR EKISERMKLL
201: QALVPGCDKV TGKALMLDEI INYVQSLQNQ VEFLSMKLAS VNPMFYDFGM DLDALMVRPE RLSALTSPLP SLQQCSPSQP TAYADTTTTF TATNNYPVMD
301: TSASILFHQG QRLNVFSQDN GSLLWDVDDQ RQKFINPSGL ISNNLCSFN
101: KVAPIERERK RKSRDGSSLT SAQSKDAREG KGKKAKKGSG LVKDGEEEQL KADKKDQKKA SEEPPTGYIH VRARRGQATD SHSLAERVRR EKISERMKLL
201: QALVPGCDKV TGKALMLDEI INYVQSLQNQ VEFLSMKLAS VNPMFYDFGM DLDALMVRPE RLSALTSPLP SLQQCSPSQP TAYADTTTTF TATNNYPVMD
301: TSASILFHQG QRLNVFSQDN GSLLWDVDDQ RQKFINPSGL ISNNLCSFN
001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQEEGEEREN FVDRSGFNNN NFCSFP
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQEEGEEREN FVDRSGFNNN NFCSFP
Arabidopsis Description
BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.