Factsheet for Zm00001d031665_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14175	Sorghum	nucleus	81.27	87.37
HORVU7Hr1G055180.4	Barley	nucleus, plastid	65.71	70.41
Zm00001d049870_P001	Maize	nucleus	70.79	69.91
Os08t0536800-01	Rice	cytosol, nucleus, plastid	64.76	66.02
TraesCS7D01G264600.3	Wheat	nucleus	66.35	62.39
TraesCS7B01G161700.3	Wheat	nucleus, plastid	66.35	62.39
TraesCS7A01G263700.1	Wheat	nucleus	60.0	60.97
Zm00001d021086_P001	Maize	nucleus, plastid	51.75	56.79
Zm00001d006110_P002	Maize	nucleus, plastid	50.79	49.84
PGSC0003DMT400069568	Potato	nucleus	34.6	38.38
VIT_17s0000g00430.t01	Wine grape	nucleus	42.22	38.11
Solyc06g072520.1.1	Tomato	nucleus, plastid	33.65	36.68
PGSC0003DMT400051137	Potato	nucleus	38.41	35.8
Solyc03g097820.1.1	Tomato	nucleus	37.46	35.76
KRH63842	Soybean	nucleus	39.05	35.55
KRH41084	Soybean	nucleus	37.14	34.51
KRH54121	Soybean	nucleus	38.1	34.38
KRH59766	Soybean	nucleus	37.14	34.21
CDY45806	Canola	nucleus	31.43	33.79
Bra022753.1-P	Field mustard	nucleus	31.75	33.67
AT5G50915.2	Thale cress	nucleus	30.48	33.57
CDX84885	Canola	nucleus	31.43	33.33
VIT_01s0244g00010.t01	Wine grape	nucleus	26.98	31.48
Zm00001d034503_P002	Maize	nucleus	24.13	29.8
Zm00001d007768_P001	Maize	nucleus	22.86	28.69
Zm00001d051569_P001	Maize	nucleus	30.48	28.07
GSMUA_Achr2P21460_001	Banana	nucleus	32.7	26.61
Zm00001d033870_P001	Maize	nucleus	26.03	25.39
Zm00001d006065_P002	Maize	nucleus	27.94	25.14
Zm00001d021019_P001	Maize	nucleus	27.3	24.29
Zm00001d017778_P001	Maize	nucleus	29.21	23.96
Zm00001d031561_P002	Maize	nucleus	27.94	22.51
Zm00001d049158_P001	Maize	nucleus	30.16	21.4
Zm00001d020826_P001	Maize	nucleus	28.25	20.51
Zm00001d046759_P001	Maize	plastid	23.17	20.51
Zm00001d013357_P001	Maize	nucleus	22.54	20.4
Zm00001d005964_P002	Maize	nucleus	28.89	20.09
Zm00001d036807_P001	Maize	nucleus	22.86	19.46
Zm00001d007311_P001	Maize	nucleus	26.98	18.44
Zm00001d042373_P002	Maize	nucleus	25.4	17.28
Zm00001d012067_P003	Maize	nucleus	26.03	17.08

Protein Annotations

EntrezGene:100193179	MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	UniProt:B4FE39	EMBL:BT035377
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	EMBL:KJ726862	ProteinID:ONM03398.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565
PANTHER:PTHR12565:SF302	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI00017B6721	EnsemblPlantsGene:Zm00001d031665	EnsemblPlants:Zm00001d031665_P001
EnsemblPlants:Zm00001d031665_T001	InterPro:bHLH_dom	SEG:seg	:	:	:

Description

bHLH-transcription factor 173Transcription factor bHLH137

Coordinates

chr1:-:198078399..198080869

Molecular Weight (calculated)

34258.2 Da

IEP (calculated)

6.679

GRAVY (calculated)

-0.567

Length

315 amino acids

Sequence
(BLAST)

001: MAGFSRPNNS LLLKMPATLA SSHTPNLSSL LFYDQNHGQA VNANAAAMMV EDDASLQSSS AVVDTSPQPQ GSAAAASPME RKRKPAEDSA TLSSAQSKED
101: CKQQQESKSR RGKRPHNKEA NTEEKSATED EATRGYIHVR ARRGQATDSH SLAERVRRER ISERMRMLQA LVPGCDKVTG KALILDEIIN YVQSLQNQVE
201: FLSMRIASMS PVLYGFGLDS DGLHDHAQKM GVMFQEALAM AGPVLSQASP AAPSEAIMDT TTPYSLHGHG QGSISFSQDN GSSTYLMQHQ QAAGEPTRQQ
301: ELLSQLVFNN MCSFQ

Best Arabidopsis Sequence Match ( AT5G50915.3 )
(BLAST)

001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQVFHFFL

Arabidopsis Description

BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.