Factsheet for Zm00001d005964_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35834	Sorghum	nucleus	81.68	84.67
Zm00001d020826_P001	Maize	nucleus	79.91	83.41
Os09t0474100-01	Rice	nucleus	69.76	73.83
TraesCS5B01G248600.1	Wheat	nucleus	67.33	71.93
TraesCS5A01G250600.1	Wheat	nucleus	67.33	71.76
TraesCS5D01G258300.1	Wheat	nucleus	66.89	71.46
GSMUA_Achr6P36210_001	Banana	nucleus	26.93	44.36
VIT_01s0010g00740.t01	Wine grape	nucleus	39.29	37.95
Bra038336.1-P	Field mustard	plastid	30.02	37.26
GSMUA_Achr8P24490_001	Banana	nucleus	33.77	36.96
Solyc05g010610.2.1	Tomato	nucleus	40.18	35.2
PGSC0003DMT400004830	Potato	nucleus	35.76	34.99
PGSC0003DMT400050585	Potato	nucleus	39.51	34.42
GSMUA_Achr9P28060_001	Banana	nucleus	23.18	34.31
Zm00001d007768_P001	Maize	nucleus	18.98	34.26
GSMUA_Achr9P18510_001	Banana	nucleus	23.18	33.65
Zm00001d033870_P001	Maize	nucleus	23.84	33.44
CDY45835	Canola	nucleus	33.33	33.33
Bra004348.1-P	Field mustard	nucleus	34.88	33.19
CDY33568	Canola	nucleus	35.1	32.99
Zm00001d034503_P002	Maize	nucleus	18.54	32.94
CDX95974	Canola	nucleus	34.66	32.78
KRH75189	Soybean	nucleus	39.29	32.36
CDX81575	Canola	nucleus	33.77	32.21
PGSC0003DMT400022704	Potato	nucleus	37.75	31.96
KRH71031	Soybean	nucleus	38.85	31.94
Zm00001d006065_P002	Maize	nucleus	24.5	31.71
AT1G68920.1	Thale cress	nucleus	33.55	31.28
Zm00001d021019_P001	Maize	nucleus	24.28	31.07
Solyc01g010130.2.1	Tomato	nucleus	36.64	30.91
Zm00001d031561_P002	Maize	nucleus	26.49	30.69
GSMUA_Achr3P10600_001	Banana	nucleus	30.24	29.72
Solyc04g005220.1.1	Tomato	nucleus	27.37	29.59
Zm00001d049870_P001	Maize	nucleus	20.75	29.47
Zm00001d031665_P001	Maize	mitochondrion	20.09	28.89
Zm00001d051569_P001	Maize	nucleus	21.63	28.66
Zm00001d021086_P001	Maize	nucleus, plastid	17.88	28.22
Zm00001d042373_P002	Maize	nucleus	27.81	27.21
Zm00001d013357_P001	Maize	nucleus	20.53	26.72
Zm00001d017778_P001	Maize	nucleus	22.52	26.56
Zm00001d006110_P002	Maize	nucleus, plastid	18.76	26.48
Zm00001d012067_P003	Maize	nucleus	28.04	26.46
Zm00001d046759_P001	Maize	plastid	20.31	25.84
Zm00001d049158_P001	Maize	nucleus	24.28	24.77
Zm00001d036807_P001	Maize	nucleus	19.87	24.32
Zm00001d007311_P001	Maize	nucleus	23.4	22.99

Protein Annotations

MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	UniProt:A0A060CZB6	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	EMBL:KJ726894
ProteinID:ONM22418.1	ProteinID:ONM22419.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF182
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI00022180D1	EnsemblPlantsGene:Zm00001d005964	EnsemblPlants:Zm00001d005964_P002	EnsemblPlants:Zm00001d005964_T002
InterPro:bHLH_dom	SEG:seg	:	:	:	:

Description

bHLH-transcription factor 151Transcription factor bHLH76

Coordinates

chr2:+:194057868..194060798

Molecular Weight (calculated)

47152.4 Da

IEP (calculated)

6.120

GRAVY (calculated)

-0.336

Length

453 amino acids

Sequence
(BLAST)

001: MDMNESGETG MEQGNASSGA PVDWQTQFNA AAFSCAPQQV PMMDSAFASA GLWASTSQAM ALSDVVGAMS AARGGGFLAP VPGFLPQGLG HFAVDSGFIE
101: RAARTSCFSG GGGGVMGASA AAFGAAGQTV NNAFSGSSEA LLLDHQKKDV VGEKGEPELG RDDGVLSPEA AGGGDCSSKG TSDSKKRRRP NEVVGSDQVQ
201: SANLPSADSA NESVHSMDKG EESSPATTTA GAGPGKSRGK GEKEVPESQK EDYIHIRARR GQATNSHSLA ERLRREKISE RMKLLQDLVP GCSKVTGKAV
301: MLDEIINYVQ SLQRQVEFLS MKLATVNPRL DLNIEGLLSK DLLRFPGAPS SSLGFPPEMM HPQLLQLSQP GRLVQGAAAA AAGMANPDVF RRIMQAQLSA
401: KDDSGGASQM LPHGSFGGVA RAAYPSSSSA LALGSHDYLR SMSRASQQDV FQI

Best Arabidopsis Sequence Match ( AT1G68920.1 )
(BLAST)

001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQKNSEAAQ SHRSQQSEEE PDNNGDEKRN DEQSPNSPGK KSNSGKQQGK QSSDPPKDGY
301: IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFN LEGLLAKDAL QLRAGSSSTT
401: PFPPNMSMAY PPLPHGFMQQ TLSSIGRTIT SPLSPMNGGF KRQETNGWEG DLQNVIHINY GAGDVTPDPQ AAATASLPAA NMKVEP

Arabidopsis Description

BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.