Factsheet for Zm00001d006110_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 5
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99171	Sorghum	nucleus	74.14	84.7
Zm00001d021086_P001	Maize	nucleus, plastid	71.65	80.14
TraesCS5B01G292100.1	Wheat	nucleus	55.14	64.13
TraesCS5D01G300100.1	Wheat	nucleus	54.83	63.77
Os09t0510500-01	Rice	nucleus	55.14	62.77
HORVU5Hr1G077390.1	Barley	nucleus	54.52	62.72
TraesCS5A01G292900.1	Wheat	nucleus	54.83	62.63
Zm00001d031665_P001	Maize	mitochondrion	49.84	50.79
Zm00001d049870_P001	Maize	nucleus	46.42	46.71
PGSC0003DMT400069568	Potato	nucleus	31.78	35.92
Solyc03g097820.1.1	Tomato	nucleus	36.14	35.15
VIT_17s0000g00430.t01	Wine grape	nucleus	38.01	34.96
PGSC0003DMT400051137	Potato	nucleus	36.45	34.62
Solyc06g072520.1.1	Tomato	nucleus, plastid	30.84	34.26
KRH63842	Soybean	nucleus	35.51	32.95
CDY45806	Canola	nucleus	29.91	32.76
Bra022753.1-P	Field mustard	nucleus	30.22	32.66
CDX84885	Canola	nucleus	30.22	32.66
AT5G50915.2	Thale cress	nucleus	28.97	32.52
KRH41084	Soybean	nucleus	34.27	32.45
KRH54121	Soybean	nucleus	35.2	32.38
KRH59766	Soybean	nucleus	34.27	32.16
Zm00001d034503_P002	Maize	nucleus	23.36	29.41
VIT_01s0244g00010.t01	Wine grape	nucleus	24.61	29.26
Zm00001d007768_P001	Maize	nucleus	22.74	29.08
Zm00001d051569_P001	Maize	nucleus	28.66	26.9
Zm00001d033870_P001	Maize	nucleus	24.92	24.77
Zm00001d021019_P001	Maize	nucleus	26.79	24.29
GSMUA_Achr2P21460_001	Banana	nucleus	29.28	24.29
Zm00001d006065_P002	Maize	nucleus	26.48	24.29
Zm00001d017778_P001	Maize	nucleus	27.73	23.18
Zm00001d031561_P002	Maize	nucleus	26.17	21.48
Zm00001d049158_P001	Maize	nucleus	28.66	20.72
Zm00001d013357_P001	Maize	nucleus	22.12	20.4
Zm00001d046759_P001	Maize	plastid	22.43	20.22
Zm00001d036807_P001	Maize	nucleus	22.12	19.19
Zm00001d020826_P001	Maize	nucleus	25.55	18.89
Zm00001d005964_P002	Maize	nucleus	26.48	18.76
Zm00001d007311_P001	Maize	nucleus	26.48	18.44
Zm00001d042373_P002	Maize	nucleus	25.55	17.71
Zm00001d012067_P003	Maize	nucleus	25.86	17.29

Protein Annotations

EntrezGene:100194274	MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	UniProt:A0A1D6ESY4	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638
ProteinID:ONM22820.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF88	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI00084302C2	EnsemblPlantsGene:Zm00001d006110	EnsemblPlants:Zm00001d006110_P002	EnsemblPlants:Zm00001d006110_T002	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

bHLH-transcription factor 23Transcription factor bHLH137

Coordinates

chr2:-:198518592..198520833

Molecular Weight (calculated)

34122.8 Da

IEP (calculated)

7.384

GRAVY (calculated)

-0.454

Length

321 amino acids

Sequence
(BLAST)

001: MASLFPQLAQ MEHGVAGASH GAPSFLFCNG AGAATADSAS LETSSGVLDT SPRGGGADSG GRKAPTKPRE DSASASASFS FSSAHSKRIT VLDRVWFREL
101: NKQDSSSKGS TKNRGGKRGR SSKEVDEEEE PKGYIHVRAR RGQATDSHSL AERVRRERIS ERMRVLQALV PGCDKVTGKA LVLDEIINYV QSLQNQVEFL
201: SMKIASLSPV LYGFGMDTTD AFSTDHTTQK IEGMLQLHHE ALAVPSSALS RPPFEAIADS THATASASSP RSYELHGDGG GGGASISFPQ DGGGYMAQTV
301: GGPRPELFNQ VVFSNHMCSF Q

Best Arabidopsis Sequence Match ( AT5G50915.3 )
(BLAST)

001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQVFHFFL

Arabidopsis Description

BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.