Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45806 | Canola | nucleus | 71.68 | 69.97 |
| CDX84885 | Canola | nucleus | 72.38 | 69.7 |
| Bra022753.1-P | Field mustard | nucleus | 72.38 | 69.7 |
| EER99171 | Sorghum | nucleus | 33.92 | 34.52 |
| PGSC0003DMT400069568 | Potato | nucleus | 33.92 | 34.15 |
| VIT_01s0244g00010.t01 | Wine grape | nucleus | 32.17 | 34.07 |
| HORVU7Hr1G055180.4 | Barley | nucleus, plastid | 34.97 | 34.01 |
| TraesCS5D01G300100.1 | Wheat | nucleus | 32.17 | 33.33 |
| EES14175 | Sorghum | nucleus | 33.92 | 33.11 |
| Os09t0510500-01 | Rice | nucleus | 32.52 | 32.98 |
| HORVU5Hr1G077390.1 | Barley | nucleus | 32.17 | 32.97 |
| TraesCS5B01G292100.1 | Wheat | nucleus | 31.82 | 32.97 |
| TraesCS5A01G292900.1 | Wheat | nucleus | 32.17 | 32.74 |
| Zm00001d021086_P001 | Maize | nucleus, plastid | 32.52 | 32.4 |
| KRH54121 | Soybean | nucleus | 39.51 | 32.38 |
| GSMUA_Achr10P... | Banana | nucleus | 31.12 | 32.13 |
| Solyc03g097820.1.1 | Tomato | nucleus | 37.06 | 32.12 |
| KRH63842 | Soybean | nucleus | 38.81 | 32.08 |
| Solyc06g072520.1.1 | Tomato | nucleus, plastid | 32.17 | 31.83 |
| VIT_17s0000g00430.t01 | Wine grape | nucleus | 38.81 | 31.81 |
| Os08t0536800-01 | Rice | cytosol, nucleus, plastid | 33.57 | 31.07 |
| PGSC0003DMT400051137 | Potato | nucleus | 36.71 | 31.07 |
| TraesCS7A01G263700.1 | Wheat | nucleus | 33.22 | 30.65 |
| Zm00001d031665_P001 | Maize | mitochondrion | 33.57 | 30.48 |
| KRH41084 | Soybean | nucleus | 35.66 | 30.09 |
| TraesCS7B01G161700.3 | Wheat | nucleus, plastid | 34.97 | 29.85 |
| TraesCS7D01G264600.3 | Wheat | nucleus | 34.97 | 29.85 |
| KRH59766 | Soybean | nucleus | 35.31 | 29.53 |
| Zm00001d049870_P001 | Maize | nucleus | 32.52 | 29.15 |
| Zm00001d006110_P002 | Maize | nucleus, plastid | 32.52 | 28.97 |
| AT5G62610.2 | Thale cress | nucleus | 27.62 | 28.11 |
| AT1G10120.1 | Thale cress | nucleus | 34.97 | 27.32 |
| AT3G23690.1 | Thale cress | nucleus | 33.92 | 26.15 |
| AT4G34530.1 | Thale cress | nucleus | 30.42 | 25.97 |
| AT1G26260.1 | Thale cress | nucleus | 34.62 | 25.38 |
| AT3G07340.1 | Thale cress | nucleus | 36.71 | 23.03 |
| AT1G59640.2 | Thale cress | nucleus | 26.92 | 22.45 |
| AT2G42300.1 | Thale cress | nucleus | 25.52 | 22.32 |
| GSMUA_Achr2P21460_001 | Banana | nucleus | 29.72 | 21.96 |
| AT5G48560.1 | Thale cress | nucleus | 36.36 | 20.88 |
| AT1G68920.1 | Thale cress | nucleus | 32.52 | 19.14 |
| AT3G57800.1 | Thale cress | nucleus | 25.87 | 17.37 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | EntrezGene:835164 | UniProt:A0A178URH5 | EMBL:AB017063 |
| ProteinID:AED96009.1 | ProteinID:AED96010.1 | EMBL:AF428350 | ArrayExpress:AT5G50915 | EnsemblPlantsGene:AT5G50915 | RefSeq:AT5G50915 |
| TAIR:AT5G50915 | RefSeq:AT5G50915-TAIR-G | EnsemblPlants:AT5G50915.2 | TAIR:AT5G50915.2 | EMBL:AY057549 | EMBL:AY087602 |
| EMBL:AY113059 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009739 | GO:GO:0009987 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| RefSeq:NP_568745.1 | RefSeq:NP_851163.1 | ProteinID:OAO96519.1 | PFAM:PF00010 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | UniProt:Q93W88 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00000A2CAA |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
Coordinates
chr5:-:20710103..20712464
Molecular Weight (calculated)
31775.1 Da
IEP (calculated)
6.403
GRAVY (calculated)
-0.638
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQEEGEEREN FVDRSGFNNN NFCSFP
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQEEGEEREN FVDRSGFNNN NFCSFP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.