Factsheet for AT1G59640.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37979	Canola	nucleus	49.85	64.29
CDX93427	Canola	nucleus	49.85	63.81
Bra019935.1-P	Field mustard	nucleus	49.56	63.43
KRH74729	Soybean	nucleus	40.52	52.65
KRH69414	Soybean	nucleus	39.07	52.55
CDY61420	Canola	extracellular	19.53	49.26
HORVU5Hr1G107520.2	Barley	cytosol, nucleus	29.45	48.79
VIT_01s0026g01140.t01	Wine grape	nucleus	39.36	48.74
Os07t0193800-01	Rice	endoplasmic reticulum	28.57	47.12
Zm00001d034503_P002	Maize	nucleus	34.11	45.88
EER90712	Sorghum	nucleus	33.53	45.45
Os03t0802900-01	Rice	nucleus	34.99	45.28
TraesCS5B01G457600.1	Wheat	nucleus, plastid	31.78	42.91
TraesCS5D01G459800.1	Wheat	nucleus, plastid	31.49	42.86
Zm00001d007768_P001	Maize	nucleus	31.2	42.63
GSMUA_Achr9P11020_001	Banana	nucleus	31.78	42.25
AT5G62610.2	Thale cress	nucleus	32.65	39.86
GSMUA_Achr7P01750_001	Banana	nucleus	35.57	36.31
GSMUA_Achr4P17570_001	Banana	golgi, vacuole	34.4	32.15
AT5G50915.2	Thale cress	nucleus	22.45	26.92
AT4G34530.1	Thale cress	nucleus	23.62	24.18
AT3G23690.1	Thale cress	nucleus	25.95	23.99
AT2G42300.1	Thale cress	nucleus	22.45	23.55
AT1G10120.1	Thale cress	nucleus	23.91	22.4
AT1G26260.1	Thale cress	nucleus	24.49	21.54
AT3G07340.1	Thale cress	nucleus	27.99	21.05
AT5G48560.1	Thale cress	nucleus	27.7	19.08
AT3G57800.1	Thale cress	nucleus	22.74	18.31
AT1G68920.1	Thale cress	nucleus	25.36	17.9

Protein Annotations

MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EntrezGene:842254	ProteinID:AAF79771.1	EMBL:AB028232
ProteinID:AEE33597.1	ProteinID:AEE33598.1	EMBL:AM269753	EMBL:AM269754	ArrayExpress:AT1G59640	EnsemblPlantsGene:AT1G59640
RefSeq:AT1G59640	TAIR:AT1G59640	RefSeq:AT1G59640-TAIR-G	EnsemblPlants:AT1G59640.2	TAIR:AT1G59640.2	EMBL:AY086373
Unigene:At.455	EMBL:BT003964	EMBL:BT005064	ncoils:Coil	GO:GO:0000003	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009791
GO:GO:0009908	GO:GO:0009987	GO:GO:0046983	GO:GO:0048446	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	RefSeq:NP_564749.1	RefSeq:NP_849829.1	PFAM:PF00010	PO:PO:0000037	PO:PO:0000293
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007611	PO:PO:0007616
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0025022	PO:PO:0025281
PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF184	UniProt:Q0JXE7	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI0000163189	Symbol:ZCW32	InterPro:bHLH_dom	:	:	:

Description

BPETranscription factor BPE [Source:UniProtKB/Swiss-Prot;Acc:Q0JXE7]

Coordinates

chr1:-:21909152..21911233

Molecular Weight (calculated)

38806.7 Da

IEP (calculated)

9.108

GRAVY (calculated)

-0.367

Length

343 amino acids

Sequence
(BLAST)

001: MDPSGMMNEG GPFNLAEIWQ FPLNGVSTAG DSSRRSFVGP NQFGDADLTT AANGDPARMS HALSQAVIEG ISGAWKRRED ESKSAKIVST IGASEGENKR
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EVMILMIINS IFSIFFTKQY MFLSRYSRGR SLDVYAVRSF KHCNKRSDLC FCSCSPKTEL KTTIFSQNMT CFCRYSRVGV
301: AISSSKHCNE PVTLCFYSYC LRKIYHFLLW NLKYKIQKSV LFS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.