Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019935.1-P | Field mustard | nucleus | 99.25 | 99.25 |
| CDY37979 | Canola | nucleus | 97.76 | 98.5 |
| KRH69414 | Soybean | nucleus | 54.85 | 57.65 |
| KRH74729 | Soybean | nucleus | 56.72 | 57.58 |
| VIT_01s0026g01140.t01 | Wine grape | nucleus | 59.33 | 57.4 |
| CDY61420 | Canola | extracellular | 27.24 | 53.68 |
| HORVU5Hr1G107520.2 | Barley | cytosol, nucleus | 40.67 | 52.66 |
| Os07t0193800-01 | Rice | endoplasmic reticulum | 40.67 | 52.4 |
| Zm00001d034503_P002 | Maize | nucleus | 47.76 | 50.2 |
| Os03t0802900-01 | Rice | nucleus | 49.63 | 50.19 |
| AT1G59640.2 | Thale cress | nucleus | 63.81 | 49.85 |
| EER90712 | Sorghum | nucleus | 45.9 | 48.62 |
| TraesCS5D01G459800.1 | Wheat | nucleus, plastid | 45.15 | 48.02 |
| Zm00001d007768_P001 | Maize | nucleus | 44.03 | 47.01 |
| TraesCS5B01G457600.1 | Wheat | nucleus, plastid | 44.4 | 46.85 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 44.78 | 46.51 |
| CDX87255 | Canola | nucleus, plastid | 47.01 | 45.0 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 47.39 | 37.8 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 48.88 | 35.69 |
| CDY25986 | Canola | plastid | 27.61 | 33.95 |
| CDY18099 | Canola | nucleus | 26.87 | 32.29 |
| CDY05670 | Canola | nucleus | 30.97 | 32.17 |
| CDX76288 | Canola | nucleus | 28.73 | 30.8 |
| CDY72360 | Canola | cytosol | 17.16 | 30.67 |
| CDX86296 | Canola | nucleus | 30.97 | 30.63 |
| CDY33821 | Canola | mitochondrion, plastid | 22.39 | 30.61 |
| CDX77488 | Canola | nucleus | 35.07 | 28.57 |
| CDY17466 | Canola | nucleus | 29.48 | 28.42 |
| CDX85122 | Canola | nucleus | 35.07 | 28.4 |
| CDY45806 | Canola | nucleus | 30.97 | 28.33 |
| CDY31048 | Canola | nucleus | 32.84 | 28.03 |
| CDX84885 | Canola | nucleus | 30.97 | 27.95 |
| CDY08308 | Canola | nucleus | 30.22 | 27.74 |
| CDY56230 | Canola | nucleus | 33.58 | 27.03 |
| CDX98249 | Canola | nucleus | 27.99 | 26.79 |
| CDY64034 | Canola | nucleus | 30.6 | 26.71 |
| CDY20659 | Canola | nucleus | 32.84 | 26.43 |
| CDY63738 | Canola | nucleus | 32.84 | 25.73 |
| CDX75440 | Canola | nucleus | 31.34 | 25.53 |
| CDY53834 | Canola | nucleus | 32.84 | 25.36 |
| CDY22605 | Canola | nucleus | 33.21 | 25.21 |
| CDX69067 | Canola | nucleus | 31.34 | 24.71 |
| CDX67710 | Canola | nucleus | 29.48 | 24.53 |
| CDX88966 | Canola | nucleus | 29.85 | 24.1 |
| CDY61581 | Canola | plastid | 16.42 | 24.04 |
| CDX79883 | Canola | nucleus | 26.87 | 23.84 |
| CDY53497 | Canola | nucleus | 26.87 | 23.3 |
| CDY51061 | Canola | nucleus | 36.19 | 22.4 |
| CDY06074 | Canola | nucleus | 29.48 | 22.19 |
| CDY57925 | Canola | nucleus | 32.84 | 22.11 |
| CDX71994 | Canola | nucleus | 29.48 | 21.88 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 11.19 | 21.74 |
| CDY35923 | Canola | nucleus, plastid | 35.82 | 21.43 |
| CDY28061 | Canola | nucleus | 35.82 | 21.19 |
| CDY47665 | Canola | cytosol | 20.15 | 21.01 |
| CDX86297 | Canola | nucleus | 37.31 | 20.41 |
| CDY45835 | Canola | nucleus | 34.33 | 20.31 |
| CDX85347 | Canola | nucleus | 36.94 | 20.16 |
| CDX81575 | Canola | nucleus | 35.07 | 19.79 |
| CDX95974 | Canola | nucleus | 34.7 | 19.42 |
| CDY33568 | Canola | nucleus | 34.7 | 19.29 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | GO:A0A078DWY7 | EnsemblPlants:CDX93427 | ProteinID:CDX93427 |
| ProteinID:CDX93427.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00156091001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EEA791 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaA06g06210D
Coordinates
chrLK031876:-:153266..155084
Molecular Weight (calculated)
29339.4 Da
IEP (calculated)
5.975
GRAVY (calculated)
-0.676
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPGGMMNEA GAYNLAEIWP YPTINGGATV NTSMRSGVSF GGPNLVHQFA DSNLISNTNC NDPARMSHAL SQAVVAGIAG ARKRREAGAE DNNVVSGSDG
101: HDANDGDSKK QKTTGCEDEV ETGTLDQKKQ QLPEPPKDYI HVRARRGQAT DSHSLAERAR REKISERMKI LQDLVPGCNK VIGKALVLDE IINYIQSLQR
201: QVEFLSMKLE AVNSRMTPGI EVFPPKEFDQ QTFENQGMQF GAQGTREYSR GASPEWLHMQ VGGGFERS
101: HDANDGDSKK QKTTGCEDEV ETGTLDQKKQ QLPEPPKDYI HVRARRGQAT DSHSLAERAR REKISERMKI LQDLVPGCNK VIGKALVLDE IINYIQSLQR
201: QVEFLSMKLE AVNSRMTPGI EVFPPKEFDQ QTFENQGMQF GAQGTREYSR GASPEWLHMQ VGGGFERS
001: MDPSGMMNEG GPFNLAEIWQ FPLNGVSTAG DSSRRSFVGP NQFGDADLTT AANGDPARMS HALSQAVIEG ISGAWKRRED ESKSAKIVST IGASEGENKR
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS
Arabidopsis Description
BPETranscription factor BPE [Source:UniProtKB/Swiss-Prot;Acc:Q0JXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.