Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25986 | Canola | plastid | 83.61 | 70.18 |
| CDY33821 | Canola | mitochondrion, plastid | 53.55 | 50.0 |
| CDY72360 | Canola | cytosol | 22.95 | 28.0 |
| CDY61420 | Canola | extracellular | 16.39 | 22.06 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 15.3 | 20.29 |
| CDX76288 | Canola | nucleus | 22.95 | 16.8 |
| CDX77488 | Canola | nucleus | 30.05 | 16.72 |
| CDX85122 | Canola | nucleus | 30.05 | 16.62 |
| CDY37979 | Canola | nucleus | 24.04 | 16.54 |
| CDY08308 | Canola | nucleus | 26.23 | 16.44 |
| CDX93427 | Canola | nucleus | 24.04 | 16.42 |
| CDY64034 | Canola | nucleus | 27.32 | 16.29 |
| CDX86296 | Canola | nucleus | 24.04 | 16.24 |
| CDY45806 | Canola | nucleus | 25.68 | 16.04 |
| CDY05670 | Canola | nucleus | 22.4 | 15.89 |
| CDY17466 | Canola | nucleus | 24.04 | 15.83 |
| CDX75440 | Canola | nucleus | 28.42 | 15.81 |
| CDX69067 | Canola | nucleus | 28.96 | 15.59 |
| Solyc09g097870.2.1 | Tomato | nucleus | 36.61 | 15.55 |
| PGSC0003DMT400042791 | Potato | nucleus | 37.16 | 15.49 |
| CDX84885 | Canola | nucleus | 25.14 | 15.49 |
| CDY56230 | Canola | nucleus | 27.87 | 15.32 |
| CDY31048 | Canola | nucleus | 25.14 | 14.65 |
| AT3G23690.1 | Thale cress | nucleus | 29.51 | 14.56 |
| CDY20659 | Canola | nucleus | 26.23 | 14.41 |
| CDY63738 | Canola | nucleus | 26.23 | 14.04 |
| CDX87255 | Canola | nucleus, plastid | 21.31 | 13.93 |
| CDY18099 | Canola | nucleus | 16.94 | 13.9 |
| CDY22605 | Canola | nucleus | 26.78 | 13.88 |
| Solyc12g098620.1.1 | Tomato | nucleus | 30.6 | 13.86 |
| CDY53834 | Canola | nucleus | 26.23 | 13.83 |
| PGSC0003DMT400011651 | Potato | nucleus | 30.6 | 13.56 |
| CDX79883 | Canola | nucleus | 21.31 | 12.91 |
| CDX98249 | Canola | nucleus | 19.67 | 12.86 |
| CDX86297 | Canola | nucleus | 34.43 | 12.86 |
| CDX85347 | Canola | nucleus | 34.43 | 12.83 |
| CDY51061 | Canola | nucleus | 30.05 | 12.7 |
| CDY28061 | Canola | nucleus | 30.05 | 12.14 |
| CDX67710 | Canola | nucleus | 21.31 | 12.11 |
| CDY57925 | Canola | nucleus | 26.23 | 12.06 |
| CDY35923 | Canola | nucleus, plastid | 29.51 | 12.05 |
| CDY53497 | Canola | nucleus | 20.22 | 11.97 |
| CDY33568 | Canola | nucleus | 31.15 | 11.83 |
| CDX88966 | Canola | nucleus | 21.31 | 11.75 |
| CDY45835 | Canola | nucleus | 28.96 | 11.7 |
| CDX81575 | Canola | nucleus | 30.05 | 11.58 |
| CDY06074 | Canola | nucleus | 22.4 | 11.52 |
| CDX95974 | Canola | nucleus | 30.05 | 11.48 |
| CDX71994 | Canola | nucleus | 22.4 | 11.36 |
| VIT_05s0029g00390.t01 | Wine grape | nucleus | 32.24 | 10.85 |
| CDY47665 | Canola | cytosol | 7.65 | 5.45 |
Protein Annotations
| EnsemblPlants:CDY61581 | EnsemblPlantsGene:GSBRNA2T00034029001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | ProteinID:CDY61581 | ProteinID:CDY61581.1 | SEG:seg | UniParc:UPI0004EE1170 |
| UniProt:A0A078JB34 | MapMan:15.5.32 | : | : | : | : |
Description
BnaCnng38070DBnaCnng38070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JB34]
Coordinates
chrLK034013:+:16661..17890
Molecular Weight (calculated)
20904.4 Da
IEP (calculated)
10.386
GRAVY (calculated)
-0.344
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MFFGQENQSR IPHPLTASRC RFSFHSPYEK LRVKSSCLIH SIRPPPHPLG VFKAFFKLRG GVVSGGIVKS KRSKHEEAES MLLPSENRFA KAVSLDEIVN
101: YVQSLERQVE LLYMKLATIN PRMESNRNAA LSIKVKENML YANACSEQRL PLGYYSLAQN MPRFSDTQFL SNYGFVQTKV ISR
101: YVQSLERQVE LLYMKLATIN PRMESNRNAA LSIKVKENML YANACSEQRL PLGYYSLAQN MPRFSDTQFL SNYGFVQTKV ISR
001: MNMDKETEQT LNYLPLGQSD PFGNGNEGTI GDFLGRYCNN PQEISPLTLQ SFSLNSQISE NFPISGGIRF PPYPGQFGSD REFGSQPTTQ ESNKSSLLDP
101: DSVSDRVHTT KSNSRKRKSI PSGNGKESPA SSSLTASNSK VSGENGGSKG GKRSKQDVAG SSKNGVEKCD SKGDNKDDAK PPEAPKDYIH VRARRGQATD
201: SHSLAERARR EKISERMTLL QDLVPGCNRI TGKAVMLDEI INYVQSLQRQ VEFLSMKLAT VNPRMEFNAN ASLSTEMIQP GESLTQSLYA MACSEQRLPS
301: AYYSLGKNMP RFSDTQFPSN DGFVHTETPG FWENNDLQSI VQMGFGDILQ QQSNNNNNNC SEPTLQMKLE P
101: DSVSDRVHTT KSNSRKRKSI PSGNGKESPA SSSLTASNSK VSGENGGSKG GKRSKQDVAG SSKNGVEKCD SKGDNKDDAK PPEAPKDYIH VRARRGQATD
201: SHSLAERARR EKISERMTLL QDLVPGCNRI TGKAVMLDEI INYVQSLQRQ VEFLSMKLAT VNPRMEFNAN ASLSTEMIQP GESLTQSLYA MACSEQRLPS
301: AYYSLGKNMP RFSDTQFPSN DGFVHTETPG FWENNDLQSI VQMGFGDILQ QQSNNNNNNC SEPTLQMKLE P
Arabidopsis Description
BHLH77Transcription factor bHLH77 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK48]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.