Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014972.1-P | Field mustard | nucleus | 99.39 | 99.39 |
| CDX85122 | Canola | nucleus | 96.05 | 95.47 |
| CDY72360 | Canola | cytosol | 39.21 | 86.0 |
| CDY56230 | Canola | nucleus | 80.24 | 79.28 |
| CDY18099 | Canola | nucleus | 52.58 | 77.58 |
| AT3G23690.1 | Thale cress | nucleus | 82.67 | 73.32 |
| CDY08308 | Canola | nucleus | 58.36 | 65.75 |
| CDY64034 | Canola | nucleus | 59.88 | 64.17 |
| CDY25986 | Canola | plastid | 27.66 | 41.74 |
| CDY05670 | Canola | nucleus | 31.31 | 39.92 |
| CDX86296 | Canola | nucleus | 32.22 | 39.11 |
| CDY33821 | Canola | mitochondrion, plastid | 23.1 | 38.78 |
| CDY37979 | Canola | nucleus | 28.57 | 35.34 |
| CDX93427 | Canola | nucleus | 28.57 | 35.07 |
| CDY45806 | Canola | nucleus | 31.0 | 34.81 |
| CDX84885 | Canola | nucleus | 31.0 | 34.34 |
| CDX76288 | Canola | nucleus | 25.84 | 34.0 |
| CDX87255 | Canola | nucleus, plastid | 27.36 | 32.14 |
| CDY31048 | Canola | nucleus | 29.79 | 31.21 |
| Solyc09g097870.2.1 | Tomato | nucleus | 40.73 | 31.09 |
| PGSC0003DMT400042791 | Potato | nucleus | 40.73 | 30.52 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 12.77 | 30.43 |
| CDY20659 | Canola | nucleus | 30.7 | 30.33 |
| CDY61581 | Canola | plastid | 16.72 | 30.05 |
| CDY17466 | Canola | nucleus | 25.23 | 29.86 |
| CDY53834 | Canola | nucleus | 30.7 | 29.11 |
| CDY22605 | Canola | nucleus | 30.7 | 28.61 |
| CDX98249 | Canola | nucleus | 24.32 | 28.57 |
| Solyc12g098620.1.1 | Tomato | nucleus | 34.65 | 28.22 |
| CDX75440 | Canola | nucleus | 27.96 | 27.96 |
| CDY61420 | Canola | extracellular | 11.55 | 27.94 |
| PGSC0003DMT400011651 | Potato | nucleus | 34.95 | 27.84 |
| CDX79883 | Canola | nucleus | 25.23 | 27.48 |
| CDY63738 | Canola | nucleus | 28.27 | 27.19 |
| CDX88966 | Canola | nucleus | 27.05 | 26.81 |
| CDX67710 | Canola | nucleus | 26.14 | 26.71 |
| CDY51061 | Canola | nucleus | 34.95 | 26.56 |
| CDX69067 | Canola | nucleus | 27.36 | 26.47 |
| CDY53497 | Canola | nucleus | 24.62 | 26.21 |
| CDX86297 | Canola | nucleus | 37.99 | 25.51 |
| CDX85347 | Canola | nucleus | 37.99 | 25.46 |
| CDX71994 | Canola | nucleus | 27.66 | 25.21 |
| CDY28061 | Canola | nucleus | 34.35 | 24.94 |
| CDY35923 | Canola | nucleus, plastid | 33.43 | 24.55 |
| CDY06074 | Canola | nucleus | 26.44 | 24.44 |
| CDY45835 | Canola | nucleus | 33.43 | 24.28 |
| CDY57925 | Canola | nucleus | 28.27 | 23.37 |
| CDX81575 | Canola | nucleus | 32.52 | 22.53 |
| VIT_05s0029g00390.t01 | Wine grape | nucleus | 36.78 | 22.24 |
| CDY33568 | Canola | nucleus | 32.52 | 22.2 |
| CDX95974 | Canola | nucleus | 31.91 | 21.92 |
| CDY47665 | Canola | cytosol | 16.72 | 21.4 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | GO:A0A078CQT4 | EnsemblPlants:CDX77488 | ProteinID:CDX77488 |
| ProteinID:CDX77488.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00128358001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF184 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE25F6 | InterPro:bHLH_dom | SEG:seg |
Description
BnaA07g06260D
Coordinates
chrLK031811:+:1129120..1131186
Molecular Weight (calculated)
36089.2 Da
IEP (calculated)
5.273
GRAVY (calculated)
-0.696
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MENQREESIK YVALGQSDDP FGNEGTIGDL LVGRFCNPQE PISPYPPGIL RFPPYPGQFG SQDSNKSSLL DPDLDRVQTA KPNSRKRKLI PSASASASGG
101: NGKDSPASSS LTASNSKVSG EIVGSKRSKQ DEAGSSNKDD AKPPEPPKDY IHVRARRGQA TDSHSLAERA RREKISERMT LLQDLVPGCN RITGKAVMLD
201: EIINYVQSLQ RQVEFLSMKL ATINPRMEFN PSAALSTEMV QPGEALTQSL YSMACSEQRL PSAYYSLAKN MPRFSDAQFP STDAFVQAET QGFWENDLQS
301: IVQMGFGDVQ QQSNNNSCSE PTLQMKLEP
101: NGKDSPASSS LTASNSKVSG EIVGSKRSKQ DEAGSSNKDD AKPPEPPKDY IHVRARRGQA TDSHSLAERA RREKISERMT LLQDLVPGCN RITGKAVMLD
201: EIINYVQSLQ RQVEFLSMKL ATINPRMEFN PSAALSTEMV QPGEALTQSL YSMACSEQRL PSAYYSLAKN MPRFSDAQFP STDAFVQAET QGFWENDLQS
301: IVQMGFGDVQ QQSNNNSCSE PTLQMKLEP
001: MNMDKETEQT LNYLPLGQSD PFGNGNEGTI GDFLGRYCNN PQEISPLTLQ SFSLNSQISE NFPISGGIRF PPYPGQFGSD REFGSQPTTQ ESNKSSLLDP
101: DSVSDRVHTT KSNSRKRKSI PSGNGKESPA SSSLTASNSK VSGENGGSKG GKRSKQDVAG SSKNGVEKCD SKGDNKDDAK PPEAPKDYIH VRARRGQATD
201: SHSLAERARR EKISERMTLL QDLVPGCNRI TGKAVMLDEI INYVQSLQRQ VEFLSMKLAT VNPRMEFNAN ASLSTEMIQP GESLTQSLYA MACSEQRLPS
301: AYYSLGKNMP RFSDTQFPSN DGFVHTETPG FWENNDLQSI VQMGFGDILQ QQSNNNNNNC SEPTLQMKLE P
101: DSVSDRVHTT KSNSRKRKSI PSGNGKESPA SSSLTASNSK VSGENGGSKG GKRSKQDVAG SSKNGVEKCD SKGDNKDDAK PPEAPKDYIH VRARRGQATD
201: SHSLAERARR EKISERMTLL QDLVPGCNRI TGKAVMLDEI INYVQSLQRQ VEFLSMKLAT VNPRMEFNAN ASLSTEMIQP GESLTQSLYA MACSEQRLPS
301: AYYSLGKNMP RFSDTQFPSN DGFVHTETPG FWENNDLQSI VQMGFGDILQ QQSNNNNNNC SEPTLQMKLE P
Arabidopsis Description
BHLH77Transcription factor bHLH77 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK48]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.