Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH67006 | Soybean | nucleus | 93.17 | 85.25 |
| KRH71879 | Soybean | nucleus | 69.67 | 72.03 |
| KRH33022 | Soybean | nucleus | 68.85 | 70.59 |
| VIT_08s0007g07870.t01 | Wine grape | nucleus | 64.75 | 65.11 |
| PGSC0003DMT400021130 | Potato | nucleus | 56.56 | 57.5 |
| Solyc10g079070.1.1 | Tomato | nucleus | 56.56 | 57.34 |
| Bra004679.1-P | Field mustard | nucleus | 46.17 | 55.96 |
| AT2G42300.1 | Thale cress | nucleus | 49.45 | 55.35 |
| CDY53497 | Canola | nucleus | 46.45 | 55.02 |
| CDX79883 | Canola | nucleus | 45.08 | 54.64 |
| CDX88966 | Canola | nucleus | 48.09 | 53.01 |
| CDY06074 | Canola | nucleus | 50.55 | 51.97 |
| Bra007358.1-P | Field mustard | nucleus | 50.55 | 51.68 |
| CDX71994 | Canola | nucleus | 50.55 | 51.25 |
| Bra014603.1-P | Field mustard | nucleus | 48.36 | 51.16 |
| CDX98249 | Canola | nucleus | 39.07 | 51.07 |
| CDX67710 | Canola | nucleus | 44.54 | 50.62 |
| Bra003300.1-P | Field mustard | nucleus | 44.26 | 50.31 |
| Os06t0613500-01 | Rice | cytosol, nucleus | 24.32 | 50.0 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 18.58 | 49.28 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 45.9 | 46.03 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 47.81 | 45.22 |
| AT3G57800.1 | Thale cress | nucleus | 52.46 | 45.07 |
| TraesCS7B01G303300.1 | Wheat | nucleus | 38.52 | 44.9 |
| CDY47665 | Canola | cytosol | 31.15 | 44.36 |
| TraesCS7D01G397300.1 | Wheat | nucleus, plastid | 38.25 | 44.3 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 34.43 | 43.45 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 42.9 | 42.9 |
| TraesCS7A01G403900.1 | Wheat | cytosol | 18.03 | 42.86 |
| HORVU7Hr1G094690.1 | Barley | plastid | 27.6 | 40.89 |
| Zm00001d046759_P001 | Maize | plastid | 37.98 | 39.04 |
| Zm00001d036807_P001 | Maize | nucleus | 37.98 | 37.57 |
| KRH56987 | Soybean | plastid | 21.86 | 35.71 |
| OQU76702 | Sorghum | nucleus | 39.89 | 35.61 |
| KRH03393 | Soybean | nucleus | 21.31 | 34.06 |
| KRH69414 | Soybean | nucleus | 23.5 | 33.73 |
| KRH69415 | Soybean | nucleus | 23.77 | 33.46 |
| KRH63442 | Soybean | nucleus | 21.58 | 32.51 |
| KRH45811 | Soybean | nucleus | 23.5 | 31.5 |
| KRH74729 | Soybean | nucleus | 22.68 | 31.44 |
| KRH54478 | Soybean | nucleus | 22.95 | 31.23 |
| KRH52141 | Soybean | nucleus | 21.31 | 26.09 |
| KRH41084 | Soybean | nucleus | 23.22 | 25.07 |
| KRH59766 | Soybean | nucleus | 23.22 | 24.85 |
| KRH54121 | Soybean | nucleus | 23.5 | 24.64 |
| KRH63842 | Soybean | nucleus | 22.95 | 24.28 |
| KRH61450 | Soybean | nucleus | 24.59 | 23.94 |
| KRH51523 | Soybean | nucleus | 24.32 | 22.82 |
| KRH15460 | Soybean | nucleus | 26.5 | 22.61 |
| KRH29448 | Soybean | nucleus | 25.68 | 22.33 |
| KRG88634 | Soybean | nucleus, plastid | 26.23 | 22.07 |
| KRH24463 | Soybean | nucleus | 24.32 | 22.03 |
| KRH60839 | Soybean | nucleus | 24.86 | 21.16 |
| KRH07417 | Soybean | nucleus, plastid | 31.97 | 19.86 |
| KRH75189 | Soybean | nucleus | 29.78 | 19.82 |
| KRH71031 | Soybean | nucleus | 29.51 | 19.6 |
| KRH66158 | Soybean | nucleus, plastid | 31.42 | 19.36 |
| KRG99606 | Soybean | nucleus | 29.78 | 18.79 |
| KRH46615 | Soybean | nucleus | 29.51 | 18.43 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | EMBL:ACUP02012102 | ncoils:Coil | EnsemblPlantsGene:GLYMA_19G143900 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | UniProt:I1N944 |
| InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRG95332 | ProteinID:KRG95332 | ProteinID:KRG95332.1 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF112 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000233EA2F |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:40499537..40508620
Molecular Weight (calculated)
40211.5 Da
IEP (calculated)
6.589
GRAVY (calculated)
-0.583
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQAPGGLRG SVHHGATLES IQFNEEIQGL MAPAPENASS FTALLELPPT QAVELLHSPE SDSARKPPNC HVSANQKPYL LNSFGSNLTF PSNAALIERA
101: AKFSVFAGEN SPPPPGEARL IPAGTGSTLD RVKNEPQETD SNPCSSSRLG CISDPAVENN IQRTAKRKER EKKAKGSSKK RKSAADETSG DGEKLPYVHV
201: RVRRGQATDS HSLAERARRE KINARMKLLQ ELVPGCDKIS GTAMVLDEII NHVQSLQRQV EILSMKLAAV NPRMDFSLDS LLATDGASLV DSNLPSMVTP
301: LMWPEIPLNG NRQHYQQQWQ LDAFHQPLWE REEVNHNFMT PENSLLSYDS SANSASLHLN QLKMEL
101: AKFSVFAGEN SPPPPGEARL IPAGTGSTLD RVKNEPQETD SNPCSSSRLG CISDPAVENN IQRTAKRKER EKKAKGSSKK RKSAADETSG DGEKLPYVHV
201: RVRRGQATDS HSLAERARRE KINARMKLLQ ELVPGCDKIS GTAMVLDEII NHVQSLQRQV EILSMKLAAV NPRMDFSLDS LLATDGASLV DSNLPSMVTP
301: LMWPEIPLNG NRQHYQQQWQ LDAFHQPLWE REEVNHNFMT PENSLLSYDS SANSASLHLN QLKMEL
001: MDLTGGFGAR SGGVGPCREP IGLESLHLGD EFRQLVTTLP PENPGGSFTA LLELPPTQAV ELLHFTDSSS SQQAAVTGIG GEIPPPLHSF GGTLAFPSNS
101: VLMERAARFS VIATEQQNGN ISGETPTSSV PSNSSANLDR VKTEPAETDS SQRLISDSAI ENQIPCPNQN NRNGKRKDFE KKGKSSTKKN KSSEENEKLP
201: YVHVRARRGQ ATDSHSLAER ARREKINARM KLLQELVPGC DKIQGTALVL DEIINHVQSL QRQVEMLSMR LAAVNPRIDF NLDTILASEN GSLMDGSFNA
301: APMQLAWPQQ AIETEQSFHH RQLQQPPTQQ WPFDGLNQPV WGREEDQAHG NDNSNLMAVS ENVMVASANL HPNQVKMEL
101: VLMERAARFS VIATEQQNGN ISGETPTSSV PSNSSANLDR VKTEPAETDS SQRLISDSAI ENQIPCPNQN NRNGKRKDFE KKGKSSTKKN KSSEENEKLP
201: YVHVRARRGQ ATDSHSLAER ARREKINARM KLLQELVPGC DKIQGTALVL DEIINHVQSL QRQVEMLSMR LAAVNPRIDF NLDTILASEN GSLMDGSFNA
301: APMQLAWPQQ AIETEQSFHH RQLQQPPTQQ WPFDGLNQPV WGREEDQAHG NDNSNLMAVS ENVMVASANL HPNQVKMEL
Arabidopsis Description
BHLH60Transcription factor bHLH60 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAI1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.