Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P09170_001 | Banana | nucleus | 16.93 | 44.63 |
| GSMUA_Achr6P16480_001 | Banana | nucleus | 18.5 | 35.98 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 23.2 | 32.74 |
| GSMUA_Achr10P... | Banana | nucleus | 18.81 | 32.61 |
| GSMUA_Achr5P24960_001 | Banana | nucleus | 17.55 | 30.43 |
| GSMUA_Achr6P36210_001 | Banana | nucleus | 24.76 | 28.73 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.63 | 28.51 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 22.57 | 27.91 |
| GSMUA_Achr9P18510_001 | Banana | nucleus | 26.02 | 26.6 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.88 | 25.8 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 24.14 | 25.16 |
| GSMUA_Achr2P09660_001 | Banana | nucleus | 24.45 | 24.61 |
| GSMUA_Achr1P09570_001 | Banana | nucleus | 25.71 | 23.63 |
| GSMUA_Achr10P... | Banana | nucleus | 20.38 | 23.47 |
| GSMUA_Achr9P01040_001 | Banana | nucleus | 20.69 | 23.4 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 25.71 | 22.47 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 23.51 | 22.32 |
| GSMUA_Achr6P09050_001 | Banana | nucleus | 21.94 | 22.15 |
| GSMUA_Achr8P24490_001 | Banana | nucleus | 28.53 | 21.98 |
| AT1G26260.1 | Thale cress | nucleus | 26.65 | 21.79 |
| GSMUA_Achr3P12130_001 | Banana | nucleus | 26.02 | 21.78 |
| GSMUA_Achr9P07330_001 | Banana | nucleus | 24.45 | 21.55 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 24.14 | 21.04 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 19.12 | 21.03 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 24.14 | 20.98 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 24.76 | 20.41 |
| GSMUA_Achr3P13490_001 | Banana | nucleus | 27.27 | 19.95 |
| GSMUA_Achr3P02490_001 | Banana | nucleus | 26.33 | 19.91 |
| GSMUA_Achr3P10600_001 | Banana | nucleus | 28.21 | 19.52 |
| GSMUA_Achr10P... | Banana | nucleus | 23.51 | 18.66 |
| GSMUA_Achr2P21280_001 | Banana | nucleus | 28.53 | 18.09 |
| GSMUA_Achr6P27780_001 | Banana | nucleus | 29.47 | 18.01 |
| GSMUA_Achr1P19120_001 | Banana | nucleus | 24.14 | 17.95 |
| GSMUA_Achr2P21460_001 | Banana | nucleus | 21.63 | 17.83 |
| GSMUA_Achr2P06090_001 | Banana | nucleus | 26.02 | 17.36 |
| GSMUA_Achr10P... | Banana | nucleus | 22.57 | 17.02 |
| GSMUA_Achr4P16120_001 | Banana | nucleus | 22.88 | 15.97 |
| GSMUA_Achr3P17290_001 | Banana | plastid | 28.53 | 15.96 |
| GSMUA_Achr7P02770_001 | Banana | nucleus | 24.14 | 15.78 |
| GSMUA_Achr7P22770_001 | Banana | nucleus | 21.63 | 15.61 |
| GSMUA_Achr10P... | Banana | mitochondrion | 26.65 | 12.92 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P09770_001 | EnsemblPlants:GSMUA_Achr9T09770_001 | EnsemblPlantsGene:GSMUA_Achr9G09770_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0002957626 | UniProt:M0TYY6 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G09770_001]
Coordinates
chr9:+:6305707..6307360
Molecular Weight (calculated)
35404.3 Da
IEP (calculated)
6.454
GRAVY (calculated)
-0.624
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRNEASALE NAAEDFLDTD WGPFSSLDQN VWLKETAGVF SHGGVPETTE IGGSHDGTGQ IARCSSFGTE KLPDMLGSIR TPSAASSEHQ TRSRCTQKRR
101: KEVSDWFAPS PQSSFDATQN ANTEWHKDVP ADIVNSATKK DESKEYDCEQ NADANSYNLD AKLAEESHQI VGVTKEDHVR SRAKRGQATN SHSLAERVRR
201: ERISERMRFL QNLVPGCGKI TGKAVMLDEI INYVKSLQQQ VEFLSMKLAA VHPEINLKHL SDSLHGSGKL EPCSASSITP LQLALLIHFL HGKASILWDA
301: ELHNVLHMHF NSDPPSRTQ
101: KEVSDWFAPS PQSSFDATQN ANTEWHKDVP ADIVNSATKK DESKEYDCEQ NADANSYNLD AKLAEESHQI VGVTKEDHVR SRAKRGQATN SHSLAERVRR
201: ERISERMRFL QNLVPGCGKI TGKAVMLDEI INYVKSLQQQ VEFLSMKLAA VHPEINLKHL SDSLHGSGKL EPCSASSITP LQLALLIHFL HGKASILWDA
301: ELHNVLHMHF NSDPPSRTQ
001: MGGESNEGGE MGFKHGDDES GGISRVGITS MPLYAKADPF FSSADWDPVV NAAAAGFSSS HYHPSMAMDN PGMSCFSHYQ PGSVSGFAAD MPASLLPFGD
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
Arabidopsis Description
BHLH74Transcription factor bHLH74 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKN9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.