Factsheet for GSMUA_Achr10P02340_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr1P09570_001
GSMUA_Achr1P19120_001
GSMUA_Achr2P09660_001
GSMUA_Achr2P13200_001
GSMUA_Achr3P12130_001
GSMUA_Achr3P13490_001
GSMUA_Achr3P26230_001
GSMUA_Achr4P03120_001
GSMUA_Achr4P28270_001
GSMUA_Achr4P32230_001
GSMUA_Achr5P01960_001
GSMUA_Achr5P07020_001
GSMUA_Achr6P04640_001
GSMUA_Achr7P08050_001
GSMUA_Achr7P14960_001
GSMUA_Achr7P27540_001
GSMUA_Achr9P09770_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02030.1	GSMUA_Achr1P09570_001	AT1G26260.1	15781858
AT5G02030.1	GSMUA_Achr1P19120_001	AT1G26260.1	15781858
AT5G02030.1	GSMUA_Achr2P09660_001	AT1G26260.1	15781858
AT5G02030.1	GSMUA_Achr3P12130_001	AT1G26260.1	15781858
AT5G02030.1	GSMUA_Achr3P13490_001	AT1G26260.1	15781858
AT5G02030.1	GSMUA_Achr9P09770_001	AT1G26260.1	15781858
AT5G02030.1	GSMUA_Achr10P...	AT4G08150.1	12897247
AT5G02030.1	GSMUA_Achr2P13200_001	AT4G08150.1	12897247
AT5G02030.1	GSMUA_Achr3P26230_001	AT4G08150.1	12897247
AT5G02030.1	GSMUA_Achr4P03120_001	AT4G08150.1	12897247
AT5G02030.1	GSMUA_Achr4P28270_001	AT4G08150.1	12897247
AT5G02030.1	GSMUA_Achr4P32230_001	AT4G08150.1	12897247
AT5G02030.1	GSMUA_Achr5P01960_001	AT4G08150.1	12897247
AT5G02030.1	GSMUA_Achr6P04640_001	AT4G08150.1	12897247
AT5G02030.1	GSMUA_Achr7P08050_001	AT4G08150.1	12897247
AT5G02030.1	GSMUA_Achr7P27540_001	AT4G08150.1	12897247
AT5G02030.1	GSMUA_Achr10P...	AT4G08150.1	15019989
AT5G02030.1	GSMUA_Achr2P13200_001	AT4G08150.1	15019989
AT5G02030.1	GSMUA_Achr3P26230_001	AT4G08150.1	15019989
AT5G02030.1	GSMUA_Achr4P03120_001	AT4G08150.1	15019989
AT5G02030.1	GSMUA_Achr4P28270_001	AT4G08150.1	15019989
AT5G02030.1	GSMUA_Achr4P32230_001	AT4G08150.1	15019989
AT5G02030.1	GSMUA_Achr5P01960_001	AT4G08150.1	15019989
AT5G02030.1	GSMUA_Achr6P04640_001	AT4G08150.1	15019989
AT5G02030.1	GSMUA_Achr7P08050_001	AT4G08150.1	15019989
AT5G02030.1	GSMUA_Achr7P27540_001	AT4G08150.1	15019989
AT5G02030.1	GSMUA_Achr10P...	AT4G08150.1	15781858
AT5G02030.1	GSMUA_Achr2P13200_001	AT4G08150.1	15781858
AT5G02030.1	GSMUA_Achr3P26230_001	AT4G08150.1	15781858
AT5G02030.1	GSMUA_Achr4P03120_001	AT4G08150.1	15781858
AT5G02030.1	GSMUA_Achr4P28270_001	AT4G08150.1	15781858
AT5G02030.1	GSMUA_Achr4P32230_001	AT4G08150.1	15781858
AT5G02030.1	GSMUA_Achr5P01960_001	AT4G08150.1	15781858
AT5G02030.1	GSMUA_Achr6P04640_001	AT4G08150.1	15781858
AT5G02030.1	GSMUA_Achr7P08050_001	AT4G08150.1	15781858
AT5G02030.1	GSMUA_Achr7P27540_001	AT4G08150.1	15781858
AT5G02030.1	GSMUA_Achr10P...	AT5G02030.1	15781858
AT5G02030.1	GSMUA_Achr10P...	AT5G02030.1	15781858
AT5G02030.1	GSMUA_Achr5P07020_001	AT5G02030.1	15781858
AT5G02030.1	GSMUA_Achr7P14960_001	AT5G02030.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P03140_001	Banana	nucleus	25.49	33.77
GSMUA_Achr2P06410_001	Banana	nucleus	24.51	17.24
GSMUA_Achr7P14960_001	Banana	nucleus	73.53	17.05
GSMUA_Achr11P...	Banana	plastid	41.18	15.97
Solyc10g086640.1.1	Tomato	nucleus	38.24	15.12
GSMUA_Achr4P14670_001	Banana	nucleus	41.18	14.14
GSMUA_Achr5P07020_001	Banana	nucleus	71.57	13.9
GSMUA_Achr4P07450_001	Banana	nucleus	41.18	13.86
GSMUA_Achr5P08840_001	Banana	nucleus	40.2	12.93
TraesCS1D01G280300.1	Wheat	nucleus	63.73	11.34
TraesCS1A01G281100.1	Wheat	nucleus	63.73	11.32
Zm00001d042864_P002	Maize	nucleus	64.71	11.24
EES18336	Sorghum	nucleus	62.75	11.23
TraesCS1B01G290200.1	Wheat	nucleus	63.73	11.21
Os05t0455200-01	Rice	nucleus	63.73	11.21
EES03882	Sorghum	nucleus	64.71	11.13
Os01t0848400-01	Rice	nucleus	64.71	10.78
Zm00001d038355_P001	Maize	nucleus	59.8	10.59
TraesCS3D01G357400.1	Wheat	nucleus	63.73	10.43
TraesCS3A01G363900.1	Wheat	nucleus	63.73	10.35
TraesCS3B01G396100.1	Wheat	nucleus	62.75	10.32
GSMUA_Achr1P26900_001	Banana	nucleus	40.2	10.3
Solyc09g011380.2.1	Tomato	nucleus	50.0	10.12
PGSC0003DMT400062353	Potato	nucleus	50.0	10.1
Zm00001d010060_P001	Maize	nucleus	55.88	9.95
CDY55113	Canola	nucleus	50.98	9.94
CDX80798	Canola	nucleus	50.98	9.77
CDY10473	Canola	nucleus	54.9	9.74
CDY40327	Canola	nucleus	54.9	9.69
KRH00065	Soybean	nucleus	53.92	9.6
Bra009618.1-P	Field mustard	nucleus	54.9	9.56
GSMUA_Achr1P23300_001	Banana	extracellular	40.2	9.49
PGSC0003DMT400049235	Potato	nucleus	52.94	9.39
CDY48107	Canola	nucleus	52.94	9.39
KRH75724	Soybean	nucleus	55.88	9.36
CDY69132	Canola	nucleus	51.96	9.23
AT5G02030.1	Thale cress	nucleus	51.96	9.22
VIT_08s0007g01290.t01	Wine grape	nucleus	57.84	9.19
Bra005703.1-P	Field mustard	nucleus	50.98	9.12
KRH65931	Soybean	nucleus	54.9	9.08
Bra028883.1-P	Field mustard	nucleus	51.96	9.08
HORVU3Hr1G085720.1	Barley	nucleus, plastid	62.75	8.5
GSMUA_Achr1P06400_001	Banana	nucleus	42.16	8.33
GSMUA_Achr4P04480_001	Banana	nucleus	34.31	8.31
HORVU1Hr1G072850.1	Barley	nucleus, plastid	62.75	8.06
GSMUA_Achr9P21580_001	Banana	nucleus	42.16	7.88
GSMUA_Achr4P12180_001	Banana	nucleus	38.24	7.46
GSMUA_Achr10P...	Banana	nucleus	30.39	7.42
GSMUA_Achr6P07130_001	Banana	nucleus	35.29	7.33
GSMUA_Achr4P13590_001	Banana	nucleus	40.2	7.21
GSMUA_Achr9P18740_001	Banana	nucleus	40.2	7.12
VIT_13s0019g02450.t01	Wine grape	nucleus	34.31	7.03
GSMUA_Achr2P04310_001	Banana	nucleus	38.24	6.99
GSMUA_Achr3P29230_001	Banana	nucleus	27.45	6.19
GSMUA_Achr6P18180_001	Banana	nucleus	38.24	6.15
GSMUA_Achr7P27440_001	Banana	nucleus	39.22	5.85
GSMUA_Achr2P06420_001	Banana	nucleus	20.59	5.69
GSMUA_Achr4P06630_001	Banana	nucleus	29.41	5.3
GSMUA_Achr2P19430_001	Banana	nucleus	27.45	5.18
GSMUA_Achr10P...	Banana	nucleus	37.25	5.04
GSMUA_Achr4P02680_001	Banana	nucleus	25.49	4.49
GSMUA_AchrUn_...	Banana	nucleus	25.49	4.38
GSMUA_Achr1P03680_001	Banana	nucleus	10.78	3.72
GSMUA_Achr10P...	Banana	plastid	2.94	3.09
GSMUA_Achr5P03130_001	Banana	cytosol	5.88	1.8
GSMUA_Achr11P...	Banana	plastid	3.92	0.98
HORVU3Hr1G072010.1	Barley	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr10G02340_001	EnsemblPlants:GSMUA_Achr10P02340_001
EnsemblPlants:GSMUA_Achr10T02340_001	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M0RER1
PFAM:PF05920	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF82	SUPFAM:SSF46689	UniParc:UPI0002949B08

Description

Putative BEL1-like homeodomain protein 8 [Source:GMGC_GENE;Acc:GSMUA_Achr10G02340_001]

Coordinates

chr10:+:7014764..7015208

Molecular Weight (calculated)

11506.6 Da

IEP (calculated)

9.289

GRAVY (calculated)

-0.699

Length

102 amino acids

Sequence
(BLAST)

001: MDKQNLAKQT GITRNQVSNW FINARVRLWK PMVEEVHSLE MHQKHQPSAG REQPRPHSSS KVSMFGGASN HERVSLTLGL EECGDAYFGK DVGSRLLQDF
101: VG

Best Arabidopsis Sequence Match ( AT2G27990.1 )
(BLAST)

001: MDMIKPDFQQ IRRDKFRVEQ MNDFPNTWTQ QQHQNIRIPN NLDLIGILQN QISVPVQTDL YQDSAATFMN MPQSIHRDPQ GPSNWRISDL SQPSTVNHGY
101: DQAGIRPNNV ADLLSDHFSS RNQILDRPLY VGRDSIPQSS MIRRSEVSCL DDNQKGCVTV ACSGTGNEIL RSSYDQGSSS GSYRGEFSFL PSLENQSVAH
201: NASNWNHGPV NVTATSHTNS KKGFPLSLLS DIPPSRDVGN AAVLSTMNIH GPLGPFTGYA SILKSSRFLE PAQKMLEEFC ISYASKIISR SESTSMEDDD
301: DDDDNLSGFS SSSEPLEPKN RLKKAKLLFL QEEVCKWYKL YNHQLQTVMS SFNTVAGLNT ATPYISLALK RTSRSFKALR TAIAEHVKQI SSHSSNGNNN
401: NRFQKRQRSL IGNNVGFESQ QQHIWRPQRG LPERAVAVLR AWLFDHFLHP YPTDSDKQML ATQTGLSRNQ VSNWFINARV RLWKPMVEEI HTLETKAIKN
501: ADTSHNIEPS NRPNTVSSPS HEQTLTGLSG TKRSRLEYMD MVGFNRGNVS LTLELRRGVD NVIQTQTQDH QFGTGSQMFH DFVG

Arabidopsis Description

BLH8BEL1-like homeodomain protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.