Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G357400.1 | Wheat | nucleus | 96.02 | 96.79 |
| TraesCS3B01G396100.1 | Wheat | nucleus | 95.38 | 96.61 |
| HORVU3Hr1G072010.1 | Barley | mitochondrion | 18.31 | 89.84 |
| Os01t0848400-01 | Rice | nucleus | 70.38 | 72.22 |
| EES03882 | Sorghum | nucleus | 66.72 | 70.66 |
| Zm00001d042864_P002 | Maize | nucleus | 65.29 | 69.85 |
| TraesCS1A01G281100.1 | Wheat | nucleus | 59.55 | 65.16 |
| GSMUA_Achr10P... | Banana | nucleus | 10.35 | 63.73 |
| HORVU3Hr1G085720.1 | Barley | nucleus, plastid | 65.76 | 54.85 |
| GSMUA_Achr7P14960_001 | Banana | nucleus | 38.22 | 54.55 |
| Solyc10g086640.1.1 | Tomato | nucleus | 19.75 | 48.06 |
| GSMUA_Achr5P07020_001 | Banana | nucleus | 39.01 | 46.67 |
| GSMUA_Achr10P... | Banana | plastid | 7.01 | 45.36 |
| PGSC0003DMT400062353 | Potato | nucleus | 32.8 | 40.79 |
| Solyc09g011380.2.1 | Tomato | nucleus | 32.64 | 40.67 |
| VIT_08s0007g01290.t01 | Wine grape | nucleus | 38.38 | 37.54 |
| AT5G02030.1 | Thale cress | nucleus | 34.08 | 37.22 |
| KRH00065 | Soybean | nucleus | 33.92 | 37.17 |
| KRH65931 | Soybean | nucleus | 36.31 | 36.95 |
| KRH75724 | Soybean | nucleus | 35.67 | 36.78 |
| CDY48107 | Canola | nucleus | 33.28 | 36.35 |
| Bra028883.1-P | Field mustard | nucleus | 33.76 | 36.3 |
| CDY69132 | Canola | nucleus | 33.12 | 36.24 |
| CDY10473 | Canola | nucleus | 33.12 | 36.17 |
| CDY40327 | Canola | nucleus | 32.96 | 35.81 |
| Bra005703.1-P | Field mustard | nucleus | 32.48 | 35.79 |
| Bra009618.1-P | Field mustard | nucleus | 33.28 | 35.67 |
| PGSC0003DMT400049235 | Potato | nucleus | 32.64 | 35.65 |
| CDY55113 | Canola | nucleus | 28.03 | 33.65 |
| CDX80798 | Canola | nucleus | 27.71 | 32.71 |
| VIT_13s0019g02450.t01 | Wine grape | nucleus | 23.41 | 29.52 |
| TraesCS7A01G022600.1 | Wheat | nucleus | 21.97 | 28.57 |
| TraesCS4A01G469900.1 | Wheat | nucleus | 22.45 | 28.43 |
| TraesCS1A01G183400.1 | Wheat | nucleus | 24.84 | 26.62 |
| TraesCS4A01G289500.1 | Wheat | nucleus | 14.33 | 24.19 |
| TraesCS5A01G514700.1 | Wheat | nucleus | 23.25 | 24.13 |
| TraesCS4A01G200800.1 | Wheat | nucleus | 25.0 | 23.64 |
| TraesCS4A01G022700.1 | Wheat | nucleus | 22.13 | 23.52 |
| TraesCS4A01G252100.2 | Wheat | nucleus | 26.75 | 21.79 |
| TraesCS5A01G007800.1 | Wheat | nucleus | 22.45 | 21.69 |
| TraesCS4A01G289400.1 | Wheat | nucleus | 21.97 | 21.63 |
| TraesCS7A01G358300.1 | Wheat | nucleus | 14.17 | 16.09 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 |
| InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF91 | SMART:SM00389 | SMART:SM00574 |
| SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS3A01G363900 | EnsemblPlants:TraesCS3A01G363900.1 | TIGR:cd00086 | SEG:seg | : |
Description
No Description!
Coordinates
chr3A:-:612523603..612527998
Molecular Weight (calculated)
67491.9 Da
IEP (calculated)
8.190
GRAVY (calculated)
-0.626
Length
628 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPAGGYGG GAEAHHHQPQ HNGHMLLHNH AHHMAAAAAA ASGGQLYHVP QHSRREKLRF PPDAAADDSP PTPLAHHHHH HQQQHQAGAW PPPAFYSYAS
101: SSSSYSPHSP TMPQGQQLVL NGLTAQQVTA QQFPQIPTQN FSLSLSSASS NPATTPPAPR KQEPGAAAPA AGPYGPFTGY ATVLGRSRFL GPAQKLLEEI
201: CDVGGAAAHV DHSVPDEGLL DADAMDGADD AAGHELDTSG PMSGAEQQWK KTRLISMMEE VCKRYRQYYQ QVQAVIASFE SVAGFSNAAP FTALALRVMA
301: RHFRCIKGMI LSQLRNTSKM PVKEGMSKDI TIFGLGGGGA PVGGFQRGGS VNGFGQPHNI WRPQRGLPER SVTVLRGWLF EHFLHPYPTD GDKQMLAKQT
401: GLTRNQVSNW FINARVRLWK PMVEEIHNLE MRQVHKHSPH DKGQQHGAHG QAHQHSSQQQ QQQRSGKRSE PCDSHPGQSS GVTRNHHHHH NAAAAASSHG
501: GGFPDDLSQM SHSMQQGQVT FAGYGALPSH HQQQQHGGMA SPQHHHHHHV GVGGAGNAGG GGGGVSLTLG LHQNNRVCFG EPLPANLAHR FGLEDVVSDP
601: YVMGSFGGGQ DRHFAKEIGG HLLHDFVG
101: SSSSYSPHSP TMPQGQQLVL NGLTAQQVTA QQFPQIPTQN FSLSLSSASS NPATTPPAPR KQEPGAAAPA AGPYGPFTGY ATVLGRSRFL GPAQKLLEEI
201: CDVGGAAAHV DHSVPDEGLL DADAMDGADD AAGHELDTSG PMSGAEQQWK KTRLISMMEE VCKRYRQYYQ QVQAVIASFE SVAGFSNAAP FTALALRVMA
301: RHFRCIKGMI LSQLRNTSKM PVKEGMSKDI TIFGLGGGGA PVGGFQRGGS VNGFGQPHNI WRPQRGLPER SVTVLRGWLF EHFLHPYPTD GDKQMLAKQT
401: GLTRNQVSNW FINARVRLWK PMVEEIHNLE MRQVHKHSPH DKGQQHGAHG QAHQHSSQQQ QQQRSGKRSE PCDSHPGQSS GVTRNHHHHH NAAAAASSHG
501: GGFPDDLSQM SHSMQQGQVT FAGYGALPSH HQQQQHGGMA SPQHHHHHHV GVGGAGNAGG GGGGVSLTLG LHQNNRVCFG EPLPANLAHR FGLEDVVSDP
601: YVMGSFGGGQ DRHFAKEIGG HLLHDFVG
001: MADAYEPYHV LQQSRRDKLR IPSLDSHFHF HPPPPPSSGG GGGVFPLADS DFLAAGGFHS NNNNNHISNP SYSNFMGFLG GPSSSSSTAV AVAGDHSFNA
101: GLSSGDVLVF KPEPLSLSLS SHPRLAYDLV VPGVVNSGFC RSAGEANAAA VTIASRSSGP LGPFTGYASI LKGSRFLKPA QMLLDEFCNV GRGIYTDKVI
201: DDDDSSLLFD PTVENLCGVS DGGGGDNGKK KSKLISMLDE VYKRYKQYYE QLQAVMGSFE CVAGLGHAAP YANLALKALS KHFKCLKNAI TDQLQFSHNN
301: KIQQQQQCGH PMNSENKTDS LRFGGSDSSR GLCSAGQRHG FPDHHAPVWR PHRGLPERAV TVLRAWLFDH FLHPYPTDTD KLMLAKQTGL SRNQVSNWFI
401: NARVRVWKPM VEEIHMLETR QSQRSSSSSW RDERTSTTVF PDNSNNNPSS SSAQQRPNNS SPPRRARNDD VHGTNNNNSY VNSGSGGGSA VGFSYGIGSS
501: NVPVMNSSTN GGVSLTLGLH HQIGLPEPFP MTTAQRFGLD GGSGDGGGGY EGQNRQFGRD FIGGSNHQFL HDFVG
101: GLSSGDVLVF KPEPLSLSLS SHPRLAYDLV VPGVVNSGFC RSAGEANAAA VTIASRSSGP LGPFTGYASI LKGSRFLKPA QMLLDEFCNV GRGIYTDKVI
201: DDDDSSLLFD PTVENLCGVS DGGGGDNGKK KSKLISMLDE VYKRYKQYYE QLQAVMGSFE CVAGLGHAAP YANLALKALS KHFKCLKNAI TDQLQFSHNN
301: KIQQQQQCGH PMNSENKTDS LRFGGSDSSR GLCSAGQRHG FPDHHAPVWR PHRGLPERAV TVLRAWLFDH FLHPYPTDTD KLMLAKQTGL SRNQVSNWFI
401: NARVRVWKPM VEEIHMLETR QSQRSSSSSW RDERTSTTVF PDNSNNNPSS SSAQQRPNNS SPPRRARNDD VHGTNNNNSY VNSGSGGGSA VGFSYGIGSS
501: NVPVMNSSTN GGVSLTLGLH HQIGLPEPFP MTTAQRFGLD GGSGDGGGGY EGQNRQFGRD FIGGSNHQFL HDFVG
Arabidopsis Description
BLH9BEL1-like homeodomain protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.