Factsheet for TraesCS4A01G289500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G022500.1	Wheat	nucleus	91.94	91.69
TraesCS4B01G025400.1	Wheat	nucleus	90.86	90.62
HORVU4Hr1G003750.1	Barley	nucleus	77.42	84.21
KXG37846	Sorghum	nucleus	50.81	53.09
Zm00001d033379_P001	Maize	nucleus	50.27	52.82
Os03t0680700-00	Rice	nucleus	48.92	52.6
CDX73171	Canola	nucleus	26.61	34.26
CDY47523	Canola	nucleus	26.34	33.91
Bra015844.1-P	Field mustard	nucleus	26.08	33.56
AT1G75430.1	Thale cress	nucleus	26.08	33.45
KRH61118	Soybean	nucleus	30.38	25.68
Solyc04g080780.2.1	Tomato	nucleus	27.42	25.5
KRH51793	Soybean	nucleus	30.38	25.28
VIT_18s0001g13130.t01	Wine grape	nucleus	31.72	25.11
PGSC0003DMT400009609	Potato	nucleus	27.96	24.59
GSMUA_Achr5P03130_001	Banana	cytosol	22.04	24.55
TraesCS4A01G022700.1	Wheat	nucleus	31.45	19.8
TraesCS7A01G022600.1	Wheat	nucleus	25.54	19.67
TraesCS4A01G469900.1	Wheat	nucleus	25.54	19.15
TraesCS4A01G200800.1	Wheat	nucleus	31.45	17.62
TraesCS4A01G289400.1	Wheat	nucleus	29.3	17.08
TraesCS5A01G007800.1	Wheat	nucleus	29.3	16.77
TraesCS1A01G183400.1	Wheat	nucleus	25.81	16.38
TraesCS5A01G514700.1	Wheat	nucleus	26.61	16.36
TraesCS1A01G281100.1	Wheat	nucleus	24.46	15.85
TraesCS7A01G358300.1	Wheat	nucleus	22.85	15.37
TraesCS3A01G363900.1	Wheat	nucleus	24.19	14.33
TraesCS4A01G252100.2	Wheat	nucleus	29.03	14.01

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF05920	PFAM:PF07526
InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF128	SMART:SM00389	SMART:SM00574
SUPFAM:SSF46689	EnsemblPlantsGene:TraesCS4A01G289500	EnsemblPlants:TraesCS4A01G289500.1	TIGR:cd00086	SEG:seg	:

Description

No Description!

Coordinates

chr4A:+:594002643..594004359

Molecular Weight (calculated)

40061.2 Da

IEP (calculated)

5.545

GRAVY (calculated)

-0.414

Length

372 amino acids

Sequence
(BLAST)

001: MVTKRLQESG SPKQARPVAT DSANGPLMLL RLREQCCREH HPAASPAGPL ALTLGAPAAK TDDVCRCCCA SDADAPALAP GVMPSVDSVL SGSRYLRPVQ
101: ELLRDAVSAV VVGGDDDESA GGGSEDDAPG EEALREIRLR AAATRRRGIQ AKNDGGAGAV QAKLLGLLSE LEGRQEHYFQ ELSRVASSFE PALGPAATAG
201: YTSLMSRAMT RHFANLRRAI LRKLAAVARP APAPRARLWT NDDSEEEEDD DEYDPAQTED MVSRLVRRTK QAVAARAAEQ VCKPLRGLPE GSVAVLRAWL
301: FNHFIDPYPS DNEKLRLAVS TGLSRRQISN WFINARVRLW KPMIEEMYAD EFSDVSSRDD DAGGGGAAAS SQ

Best Arabidopsis Sequence Match ( AT1G75430.1 )
(BLAST)

001: MEDFRVRHEC SSLRGTLLDS RYAKAVQCLV EEVIDIGGRE VELCNNILIN QLFPGRRRPG FALSSEIKSE LCSSGFMSLP ENHEIHIKIT KLLSLLQQVE
101: ERFEQYCNQL EQVISSFEEI AGEGSSKVYT GLALQAMTRH FGSLEEAIIS QLNSVRRRFI ISHQDVPKII SSGLSQLSLF DGNTTSSSLQ RLGLVQGPQR
201: HAWKPIRGLP ETSVAILRAW LFQHFLHPYP NEAEKLVLAS QTGLSKNQVS NWFINARVRL WKPMIEEMYR EEFGDSLDES MQREANDDSN

Arabidopsis Description

BLH11Uncharacterized protein At1g75430 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV32]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.