Factsheet for Os03t0680700-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033379_P001	Maize	nucleus	57.51	56.21
KXG37846	Sorghum	nucleus	55.49	53.93
HORVU4Hr1G003750.1	Barley	nucleus	49.42	50.0
TraesCS4A01G289500.1	Wheat	nucleus	52.6	48.92
TraesCS4D01G022500.1	Wheat	nucleus	52.31	48.53
TraesCS4B01G025400.1	Wheat	nucleus	51.16	47.45
CDX73171	Canola	nucleus	28.32	33.91
CDY47523	Canola	nucleus	28.03	33.56
Bra015844.1-P	Field mustard	nucleus	27.75	33.22
AT1G75430.1	Thale cress	nucleus	27.17	32.41
GSMUA_Achr5P03130_001	Banana	cytosol	25.43	26.35
Solyc04g080780.2.1	Tomato	nucleus	29.77	25.75
KRH61118	Soybean	nucleus	32.37	25.45
VIT_18s0001g13130.t01	Wine grape	nucleus	34.1	25.11
PGSC0003DMT400009609	Potato	nucleus	30.64	25.06
KRH51793	Soybean	nucleus	32.08	24.83
Os11t0158600-00	Rice	nucleus	25.14	20.71
Os06t0108900-02	Rice	nucleus	29.77	19.43
Os03t0165300-02	Rice	endoplasmic reticulum, vacuole	32.66	18.43
Os10t0534900-01	Rice	nucleus	30.92	18.26
Os12t0636200-01	Rice	nucleus	32.66	17.47
Os05t0455200-01	Rice	nucleus	29.19	17.41
Os03t0124000-01	Rice	nucleus	29.48	17.26
Os01t0848400-01	Rice	nucleus	29.77	16.83
Os03t0680800-02	Rice	nucleus	32.37	16.59
Os02t0226600-01	Rice	nucleus	24.28	15.58
Os06t0562300-00	Rice	nucleus	23.99	15.23
Os03t0732100-01	Rice	nucleus	31.21	13.67
Os11t0158832-00	Rice	nucleus	9.25	12.17

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	ProteinID:AAK00974.1	ProteinID:ABF98211.1	ProteinID:BAH92312.1	ProteinID:BAS85754.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356
EnsemblPlantsGene:Os03g0680700	EnsemblPlants:Os03t0680700-00	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071
PANTHER:PTHR11850	PANTHER:PTHR11850:SF128	UniProt:Q9AYD8	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689
UniParc:UPI00000AB14A	SEG:seg	:	:	:	:

Description

Similar to Knotted1-interacting protein. (Os03t0680700-00)

Coordinates

chr3:-:27051401..27053435

Molecular Weight (calculated)

36569.8 Da

IEP (calculated)

6.393

GRAVY (calculated)

-0.373

Length

346 amino acids

Sequence
(BLAST)

001: MVASKQLHSQ RCGGHYCQLH HHRPEEIAGA GAESHRRDGS SGCGGAGPMV VLTLGSGAAA AEDDGGGRSR CCCGAGGAAP ATMVSALRGS RYLLPAQELL
101: REAVSAAAAS ARGGDDDDEA VASFPHDGKS TGIGGGGGGV QAKLLSLLSE LESRHEHYFG ELRRVSASFE PALGAGATAG YTALMAQAMS HHFGSLRRAI
201: LRKLRLHAAA AARTRSALLR LARDAMEEDD EGDGEEEEEV VNRVVRRTKQ AAAARAEQAW RPLRGLPEDA VGVLRAWLFD HFLHPYPNDN EKLMLAVATG
301: LSRTQISNWF INARVRLWKP MVEEMYNDEF DDDDAGSGGG GASSSS

Best Arabidopsis Sequence Match ( AT1G75430.1 )
(BLAST)

001: MEDFRVRHEC SSLRGTLLDS RYAKAVQCLV EEVIDIGGRE VELCNNILIN QLFPGRRRPG FALSSEIKSE LCSSGFMSLP ENHEIHIKIT KLLSLLQQVE
101: ERFEQYCNQL EQVISSFEEI AGEGSSKVYT GLALQAMTRH FGSLEEAIIS QLNSVRRRFI ISHQDVPKII SSGLSQLSLF DGNTTSSSLQ RLGLVQGPQR
201: HAWKPIRGLP ETSVAILRAW LFQHFLHPYP NEAEKLVLAS QTGLSKNQVS NWFINARVRL WKPMIEEMYR EEFGDSLDES MQREANDDSN

Arabidopsis Description

BLH11Uncharacterized protein At1g75430 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV32]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.