Factsheet for TraesCS4B01G025400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G022500.1	Wheat	nucleus	90.88	90.88
TraesCS4A01G289500.1	Wheat	nucleus	90.62	90.86
HORVU4Hr1G003750.1	Barley	nucleus	78.55	85.67
KXG37846	Sorghum	nucleus	51.21	53.65
Zm00001d033379_P001	Maize	nucleus	49.6	52.26
Os03t0680700-00	Rice	nucleus	47.45	51.16
CDX73171	Canola	nucleus	26.27	33.91
CDY47523	Canola	nucleus	26.01	33.56
AT1G75430.1	Thale cress	nucleus	26.01	33.45
Bra015844.1-P	Field mustard	nucleus	25.74	33.22
GSMUA_Achr5P03130_001	Banana	cytosol	23.06	25.75
KRH61118	Soybean	nucleus	30.29	25.68
Solyc04g080780.2.1	Tomato	nucleus	27.08	25.25
KRH51793	Soybean	nucleus	30.03	25.06
VIT_18s0001g13130.t01	Wine grape	nucleus	31.37	24.89
PGSC0003DMT400009609	Potato	nucleus	27.61	24.35
TraesCS4B01G280700.1	Wheat	nucleus	31.9	20.24
TraesCS4B01G114600.1	Wheat	nucleus	31.9	17.98
TraesCS4B01G025500.1	Wheat	nucleus	29.76	17.37
TraesCS4B01G345600.1	Wheat	nucleus	27.88	17.02
TraesCS1B01G191800.1	Wheat	nucleus	26.27	16.75
TraesCS5B01G006400.1	Wheat	nucleus	29.76	16.49
TraesCS1B01G290200.1	Wheat	nucleus	24.93	16.03
TraesCS7B01G269400.1	Wheat	nucleus	21.98	14.86
TraesCS3B01G396100.1	Wheat	nucleus	24.66	14.84
TraesCS4B01G063100.1	Wheat	nucleus, plastid	28.95	14.57

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	PFAM:PF05920	PFAM:PF07526
InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF128	SMART:SM00389	SMART:SM00574
SUPFAM:SSF46689	EnsemblPlantsGene:TraesCS4B01G025400	EnsemblPlants:TraesCS4B01G025400.1	TIGR:cd00086	SEG:seg	:

Description

No Description!

Coordinates

chr4B:-:18091908..18093975

Molecular Weight (calculated)

40084.2 Da

IEP (calculated)

5.201

GRAVY (calculated)

-0.397

Length

373 amino acids

Sequence
(BLAST)

001: MVTKRLQESG SPKQARPAPV ATDSANGPLM LLRLREQCCC GHPAASPVGP LALTLGAPAA TDDACRRCCC ASDADADAPA LAPGVMPSVD SVLRGSRYLR
101: PVQELLRDAV SAVVGGDDDE SAGGGSEDEA GQEAALRELR LRAAATSRRG ILAKNDGGAG AVQAKLLGLL SELEGRQEHY FQELSRVASS FEPALGPAAT
201: AGYTSLMSRA MTRHFGNLRR AILRKLAAVT RPAPAPRARL WANDDSEEDE EDDDEQDYDP VQTEDMVSRL VRRTKQAAAA RAAEQVCKPL RGLPEGSVAV
301: LRAWLFNHFL DPYPSDNEKL RLAVSTGLSR RQISNWFINA RVRLWKPMVE EMYADEFSAV SSRDDDGGAA SSQ

Best Arabidopsis Sequence Match ( AT1G75430.1 )
(BLAST)

001: MEDFRVRHEC SSLRGTLLDS RYAKAVQCLV EEVIDIGGRE VELCNNILIN QLFPGRRRPG FALSSEIKSE LCSSGFMSLP ENHEIHIKIT KLLSLLQQVE
101: ERFEQYCNQL EQVISSFEEI AGEGSSKVYT GLALQAMTRH FGSLEEAIIS QLNSVRRRFI ISHQDVPKII SSGLSQLSLF DGNTTSSSLQ RLGLVQGPQR
201: HAWKPIRGLP ETSVAILRAW LFQHFLHPYP NEAEKLVLAS QTGLSKNQVS NWFINARVRL WKPMIEEMYR EEFGDSLDES MQREANDDSN

Arabidopsis Description

BLH11Uncharacterized protein At1g75430 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV32]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.