Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G193800.1 | Wheat | nucleus | 97.44 | 96.77 |
| TraesCS1A01G183400.1 | Wheat | nucleus | 96.92 | 96.76 |
| HORVU1Hr1G049760.1 | Barley | nucleus | 94.7 | 92.95 |
| Os10t0534900-01 | Rice | nucleus | 62.05 | 61.95 |
| EER92018 | Sorghum | nucleus | 61.88 | 57.1 |
| TraesCS4B01G345600.1 | Wheat | nucleus | 56.58 | 54.17 |
| Zm00001d029736_P001 | Maize | nucleus, plastid | 61.2 | 52.03 |
| CDY45383 | Canola | nucleus | 21.54 | 47.91 |
| GSMUA_Achr1P06400_001 | Banana | nucleus | 36.58 | 41.47 |
| GSMUA_Achr2P04310_001 | Banana | nucleus | 37.61 | 39.43 |
| VIT_02s0025g00200.t01 | Wine grape | nucleus | 41.03 | 37.15 |
| PGSC0003DMT400032122 | Potato | nucleus | 39.32 | 36.33 |
| KRH77572 | Soybean | nucleus | 39.66 | 35.91 |
| KRH27902 | Soybean | nucleus | 39.32 | 35.83 |
| KRH59951 | Soybean | nucleus | 38.63 | 35.59 |
| Solyc08g081400.2.1 | Tomato | nucleus | 38.97 | 35.4 |
| KRH41225 | Soybean | nucleus | 38.97 | 35.29 |
| CDY44476 | Canola | nucleus | 33.85 | 34.86 |
| Bra025497.1-P | Field mustard | nucleus | 34.53 | 34.06 |
| AT5G41410.1 | Thale cress | nucleus | 34.53 | 33.06 |
| TraesCS1B01G290200.1 | Wheat | nucleus | 27.01 | 27.24 |
| TraesCS4B01G280700.1 | Wheat | nucleus | 27.18 | 27.04 |
| TraesCS4B01G025400.1 | Wheat | nucleus | 16.75 | 26.27 |
| TraesCS4B01G114600.1 | Wheat | nucleus | 29.23 | 25.83 |
| TraesCS3B01G396100.1 | Wheat | nucleus | 26.84 | 25.32 |
| TraesCS4B01G025500.1 | Wheat | nucleus | 27.18 | 24.88 |
| TraesCS4B01G063100.1 | Wheat | nucleus, plastid | 31.28 | 24.7 |
| TraesCS5B01G006400.1 | Wheat | nucleus | 27.35 | 23.77 |
| TraesCS7B01G269400.1 | Wheat | nucleus | 16.58 | 17.57 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 |
| PFAM:PF07526 | InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF96 | SMART:SM00389 |
| SMART:SM00574 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS1B01G191800 | EnsemblPlants:TraesCS1B01G191800.1 | TIGR:cd00086 | SEG:seg |
Description
No Description!
Coordinates
chr1B:-:342972636..342976850
Molecular Weight (calculated)
62662.1 Da
IEP (calculated)
7.065
GRAVY (calculated)
-0.518
Length
585 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHDPSLVGY ADYFAATGSN GGGVTLVPEV DARAEHQMYG GGLHHHHSGV DMFGARGFGM APAGEATSAQ SKAALDVDVD GSSTISFFRG EQHHHHHQQL
101: QMGQAPLSLS LHGQPDAGSS SFMLHHQLGG GEPRLQQHQQ TAPAAWQVQG AGSGWQLRGS RFLLPTQQLL QEFCSIPADT DSKAPKKPAQ EEHGSSSSAS
201: WPPSSTQIQS MDAAELQRLK AKLYTMIEEV DRRYRRYREQ MRAVAASFEA VAGQRAAAVY TRMASRTISR HFRSVRDGVA AQVRAVRGAL GEKDAGAAVP
301: GMTKGETPRL RALDQCLRQH KAYQSGMLES HPWRPQRGLP ERAVSVLRAW LFEHFLHPYP SDVDKHILAR QTGLSRSQVS NWFINARVRL WKPMVEEMYA
401: EEMKDKEEGS GGDGGGQSAQ QAGDLANPNP AAGSYASEGR GEQKPTRAQL HQLHDAGSLA SVVSIGQSTD PQGLNFGMMD HLDFDAYEAA TAGFGNGVSL
501: TLGLQHQQQQ QHHHGGVNVA AFADASPSSS SAAHGGAAEF LFMAGEGAHP SANGQFGAGM GSGADVASQY HRGLGGFHLL RDLAG
101: QMGQAPLSLS LHGQPDAGSS SFMLHHQLGG GEPRLQQHQQ TAPAAWQVQG AGSGWQLRGS RFLLPTQQLL QEFCSIPADT DSKAPKKPAQ EEHGSSSSAS
201: WPPSSTQIQS MDAAELQRLK AKLYTMIEEV DRRYRRYREQ MRAVAASFEA VAGQRAAAVY TRMASRTISR HFRSVRDGVA AQVRAVRGAL GEKDAGAAVP
301: GMTKGETPRL RALDQCLRQH KAYQSGMLES HPWRPQRGLP ERAVSVLRAW LFEHFLHPYP SDVDKHILAR QTGLSRSQVS NWFINARVRL WKPMVEEMYA
401: EEMKDKEEGS GGDGGGQSAQ QAGDLANPNP AAGSYASEGR GEQKPTRAQL HQLHDAGSLA SVVSIGQSTD PQGLNFGMMD HLDFDAYEAA TAGFGNGVSL
501: TLGLQHQQQQ QHHHGGVNVA AFADASPSSS SAAHGGAAEF LFMAGEGAHP SANGQFGAGM GSGADVASQY HRGLGGFHLL RDLAG
001: MGLATTTSSM SQDYHHHQGI FSFSNGFHRS SSTTHQEEVD ESAVVSGAQI PVYETAGMLS EMFAYPGGGG GGSGGEILDQ STKQLLEQQN RHNNNNNSTL
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF
Arabidopsis Description
BLH4BEL1-like homeodomain 4 [Source:TAIR;Acc:AT2G23760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.