Factsheet for PGSC0003DMT400032122

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400012712
PGSC0003DMT400040351
PGSC0003DMT400043083
PGSC0003DMT400058528
PGSC0003DMT400073252

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41410.1	PGSC0003DMT400043083	AT1G62360.1	11701881
AT5G41410.1	PGSC0003DMT400043083	AT1G62360.1	15781858
AT5G41410.1	PGSC0003DMT400043083	AT1G62360.1	17873098
AT5G41410.1	PGSC0003DMT400058528	AT1G62990.1	11701881
AT5G41410.1	PGSC0003DMT400012712	AT4G08150.1	11701881
AT5G41410.1	PGSC0003DMT400012712	AT4G08150.1	15781858
AT5G41410.1	PGSC0003DMT400012712	AT4G08150.1	17873098
AT5G41410.1	PGSC0003DMT400073252	AT4G18830.1	15781858
AT5G41410.1	PGSC0003DMT400040351	AT5G11060.1	11701881
AT5G41410.1	PGSC0003DMT400040351	AT5G25220.1	11701881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g081400.2.1	Tomato	nucleus	92.89	91.3
VIT_02s0025g00200.t01	Wine grape	nucleus	61.14	59.91
KRH27902	Soybean	nucleus	57.35	56.54
KRH77572	Soybean	nucleus	57.66	56.5
CDY45383	Canola	nucleus	23.22	55.89
KRH59951	Soybean	nucleus	55.45	55.28
GSMUA_Achr1P03680_001	Banana	nucleus	25.75	55.07
KRH41225	Soybean	nucleus	55.45	54.33
GSMUA_Achr2P04310_001	Banana	nucleus	43.29	49.1
GSMUA_Achr1P06400_001	Banana	nucleus	39.18	48.06
GSMUA_Achr4P04480_001	Banana	nucleus	31.75	47.74
CDY44476	Canola	nucleus	41.23	45.95
Bra025497.1-P	Field mustard	nucleus	42.18	45.03
AT5G41410.1	Thale cress	nucleus	43.44	45.01
GSMUA_Achr9P18740_001	Banana	nucleus	40.13	44.1
PGSC0003DMT400056612	Potato	nucleus	20.38	43.73
Zm00001d035907_P001	Maize	nucleus	32.7	41.57
TraesCS7A01G022600.1	Wheat	nucleus	31.44	41.2
GSMUA_Achr4P12180_001	Banana	nucleus	33.97	41.11
TraesCS7D01G019800.1	Wheat	nucleus	31.28	40.99
EER89055	Sorghum	nucleus	33.65	40.65
Os06t0108900-02	Rice	nucleus	33.49	40.0
TraesCS1A01G183400.1	Wheat	nucleus	36.65	39.59
TraesCS1D01G193800.1	Wheat	nucleus	36.81	39.56
TraesCS4A01G469900.1	Wheat	nucleus	30.96	39.52
TraesCS1B01G191800.1	Wheat	nucleus	36.33	39.32
HORVU1Hr1G049760.1	Barley	nucleus	36.33	38.59
Os10t0534900-01	Rice	nucleus	35.7	38.57
KXG40303	Sorghum	nucleus	36.97	37.38
Os03t0124000-01	Rice	nucleus	34.76	37.23
Zm00001d027435_P001	Maize	nucleus	36.18	36.94
TraesCS4D01G340700.1	Wheat	nucleus	35.7	36.87
TraesCS4B01G345600.1	Wheat	nucleus	35.55	36.82
TraesCS5A01G514700.1	Wheat	nucleus	34.91	36.53
HORVU4Hr1G084590.2	Barley	nucleus	34.91	35.53
EER92018	Sorghum	nucleus	32.07	32.02
Zm00001d029736_P001	Maize	nucleus, plastid	32.54	29.94
PGSC0003DMT400009609	Potato	nucleus	19.75	29.55
PGSC0003DMT400062353	Potato	nucleus	23.38	29.31
PGSC0003DMT400026172	Potato	nucleus	32.39	27.78
PGSC0003DMT400079517	Potato	nucleus	28.12	27.6
PGSC0003DMT400049235	Potato	nucleus	24.64	27.13
PGSC0003DMT400015183	Potato	nucleus	29.07	26.9
PGSC0003DMT400009610	Potato	nucleus	26.38	25.26
PGSC0003DMT400050527	Potato	nucleus	27.01	24.22
PGSC0003DMT400054945	Potato	nucleus	26.54	23.86
PGSC0003DMT400020825	Potato	nucleus	25.28	23.12
PGSC0003DMT400076995	Potato	nucleus	18.01	21.11

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:102577511	MapMan:15.5.3.5	ProteinID:AAN03624	ProteinID:AAN03624.1	EMBL:AF406700
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009506	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:M1AWW9	PFAM:PF05920
PFAM:PF07526	EnsemblPlantsGene:PGSC0003DMG400012329	PGSC:PGSC0003DMG400012329	EnsemblPlants:PGSC0003DMT400032122	InterPro:POX_dom	PFscan:PS50071
PANTHER:PTHR11850	PANTHER:PTHR11850:SF66	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI0002956EDC
RefSeq:XP_006343945.1	SEG:seg	:	:	:	:

Description

BEL14 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400012329]

Coordinates

chr8:+:55113010..55117955

Molecular Weight (calculated)

71388.3 Da

IEP (calculated)

6.754

GRAVY (calculated)

-0.770

Length

633 amino acids

Sequence
(BLAST)

001: MASHHQESIR EEIKPRSSSM VTSTGYWFSS DTNNPNPTPH NMVNHQLQNF ETNPEMYNLS STTSSMDQMI GFPPNNNNPH HVLWKGNFLN KINGVDDDDD
101: HGPSSSKNIS EQFYQHGSHE NMLTTTTTHH DDHQGSWHHD NNRTLLVDDP SMRCVFPCEG NERPSQGLSL SLCSSNPPSI GLQSFELRHQ DLQQGLIHDG
201: FLGKSTNIQQ GYFHHHHQVR DSKYLGPAQE LLSEFCSLGI KKNNDHSSSK VLLKQHESTA STSKKQLLQS LDLLELQKRK TKLLQMLEEV DRRYKHYCDQ
301: MKAVVSSFEA VAGNGAATVY SALASRAMSR HFRCLRDGIV AQIKATKMAM GEKDSTSTLI PGSTRGETPR LRLLDQTLRQ QKAFQQMNMM ETHPWRPQRG
401: LPERSVSVLR AWLFEHFLHP YPSDVDKHIL ARQTGLSRSQ VSNWFINARV RLWKPMVEEM YIEETKEEEN VGSPDGSKAL IDDMTIHQSH IDHHQDQKPN
501: LVRIDSECIS SIINHHPHEK NDQNYGVIRG GDQSFGAIEL DFSTNIAYGT SGGDHHHHGG GVSLTLGLQQ HGGSGGSSMG LTTFSSQPSH NQSSLFYPRD
601: DDQVQYTSLL DSENQNLPYR NLMGAQLLHD LAG

Best Arabidopsis Sequence Match ( AT5G41410.1 )
(BLAST)

001: MARDQFYGHN NHHHQEQQHQ MINQIQGFDE TNQNPTDHHH YNHQIFGSNS NMGMMIDFSK QQQIRMTSGS DHHHHHHQTS GGTDQNQLLE DSSSAMRLCN
101: VNNDFPSEVN DERPPQRPSQ GLSLSLSSSN PTSISLQSFE LRPQQQQQQG YSGNKSTQHQ NLQHTQMMMM MMNSHHQNNN NNNHQHHNHH QFQIGSSKYL
201: SPAQELLSEF CSLGVKESDE EVMMMKHKKK QKGKQQEEWD TSHHSNNDQH DQSATTSSKK HVPPLHSLEF MELQKRKAKL LSMLEELKRR YGHYREQMRV
301: AAAAFEAAVG LGGAEIYTAL ASRAMSRHFR CLKDGLVGQI QATSQALGER EEDNRAVSIA ARGETPRLRL LDQALRQQKS YRQMTLVDAH PWRPQRGLPE
401: RAVTTLRAWL FEHFLHPYPS DVDKHILARQ TGLSRSQVSN WFINARVRLW KPMIEEMYCE ETRSEQMEIT NPMMIDTKPD PDQLIRVEPE SLSSIVTNPT
501: SKSGHNSTHG TMSLGSTFDF SLYGNQAVTY AGEGGPRGDV SLTLGLQRND GNGGVSLALS PVTAQGGQLF YGRDHIEEGP VQYSASMLDD DQVQNLPYRN
601: LMGAQLLHDI V

Arabidopsis Description

BEL1Homeobox protein BEL1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q38897]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.