CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90950
EER91090
EER95833
EES01480
EES19813
KXG20488
KXG40306
OQU84501
OQU90921
OQU91064

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41410.1	KXG40306	AT1G62990.1	11701881
AT5G41410.1	EER90950	AT4G08150.1	11701881
AT5G41410.1	EER91090	AT4G08150.1	11701881
AT5G41410.1	EER95833	AT4G08150.1	11701881
AT5G41410.1	OQU90921	AT4G08150.1	11701881
AT5G41410.1	OQU91064	AT4G08150.1	11701881
AT5G41410.1	EER90950	AT4G08150.1	15781858
AT5G41410.1	EER91090	AT4G08150.1	15781858
AT5G41410.1	EER95833	AT4G08150.1	15781858
AT5G41410.1	OQU90921	AT4G08150.1	15781858
AT5G41410.1	OQU91064	AT4G08150.1	15781858
AT5G41410.1	EER90950	AT4G08150.1	17873098
AT5G41410.1	EER91090	AT4G08150.1	17873098
AT5G41410.1	EER95833	AT4G08150.1	17873098
AT5G41410.1	OQU90921	AT4G08150.1	17873098
AT5G41410.1	OQU91064	AT4G08150.1	17873098
AT5G41410.1	EES01480	AT4G18830.1	15781858
AT5G41410.1	EES19813	AT4G18830.1	15781858
AT5G41410.1	KXG20488	AT4G32040.1	11701881
AT5G41410.1	OQU84501	AT4G32040.1	11701881
AT5G41410.1	KXG20488	AT4G32040.1	17873098
AT5G41410.1	OQU84501	AT4G32040.1	17873098
AT5G41410.1	KXG20488	AT5G11060.1	11701881
AT5G41410.1	OQU84501	AT5G11060.1	11701881
AT5G41410.1	KXG20488	AT5G25220.1	11701881
AT5G41410.1	OQU84501	AT5G25220.1	11701881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035907_P001	Maize	nucleus	79.39	83.53
Os06t0108900-02	Rice	nucleus	58.59	57.92
TraesCS7D01G019800.1	Wheat	nucleus	53.05	57.56
TraesCS7A01G022600.1	Wheat	nucleus	52.29	56.73
TraesCS4A01G469900.1	Wheat	nucleus	53.05	56.05
CDY45383	Canola	nucleus	22.9	45.63
GSMUA_Achr2P04310_001	Banana	nucleus	42.18	39.61
GSMUA_Achr1P06400_001	Banana	nucleus	38.74	39.34
VIT_02s0025g00200.t01	Wine grape	nucleus	42.56	34.52
KXG40303	Sorghum	nucleus	41.22	34.5
KRH27902	Soybean	nucleus	41.98	34.27
KRH77572	Soybean	nucleus	42.18	34.21
PGSC0003DMT400032122	Potato	nucleus	40.65	33.65
Solyc08g081400.2.1	Tomato	nucleus	40.84	33.23
EER92018	Sorghum	nucleus	40.08	33.12
CDY44476	Canola	nucleus	35.5	32.75
Bra025497.1-P	Field mustard	nucleus	36.83	32.55
AT5G41410.1	Thale cress	nucleus	37.79	32.41
KRH41225	Soybean	nucleus	39.5	32.04
KRH59951	Soybean	nucleus	38.17	31.5
KXG37846	Sorghum	nucleus	19.08	28.09
EER92806	Sorghum	nucleus	30.15	26.78
EES18336	Sorghum	nucleus	26.53	24.39
EER91079	Sorghum	nucleus	29.77	24.04
KXG24130	Sorghum	nucleus	29.96	23.86
EER93512	Sorghum	nucleus, plastid	34.54	23.51
EES03882	Sorghum	nucleus	26.14	23.1
EES09309	Sorghum	nucleus	29.77	22.61
KXG20197	Sorghum	nucleus	16.03	17.0
EES04785	Sorghum	nucleus	17.75	16.49

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	UniProt:C5Z279	ncoils:Coil	EnsemblPlants:EER89055	ProteinID:EER89055
ProteinID:EER89055.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom
InterPro:IPR001356	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850
PANTHER:PTHR11850:SF66	SMART:SM00389	SMART:SM00574	EnsemblPlantsGene:SORBI_3010G006300	SUPFAM:SSF46689	UniParc:UPI0007F1B77F
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:515296..521202

Molecular Weight (calculated)

57043.6 Da

IEP (calculated)

7.399

GRAVY (calculated)

-0.385

Length

524 amino acids

Sequence
(BLAST)

001: MAVHHPHLLD FSPPPNTVAM EAPPAPHFDH GGHHHHHLLG LHVDGGVGMS VGGGVPHRAL ADDDTVAAWA PQAAVSLSLY NYDNTAGGSS SSLFGHDEPQ
101: FGAMPPAAAL ALPNHQQLPT TTSSMQQPFQ LRSSKYLAPV QDLLSEFCSL EGDLLHAMNK RAPRAGNKWD DVETSSSSSG LWGHPSLSSM DLLELERRKA
201: RLLSMVEEVD RRYRRYREQM RAVEVSFEAV AGAGASQVYT RLALRAMSRH FRCLRDALVA QVRALRKAMG ERDGGPGAAA AATAAGATKG DTPRLKVLDQ
301: CLRQQRAFQH PGTIENYPWR PQRGLPERAV AVLRAWLFEH FLHPYPNDVD KHILARQTGL SRSQVSNWFI NARVRLWKPM IEEMYTEEVN QKSNATPQNP
401: SGGGVIKPEQ MSTTAVPAAI GGDHSHFLAT SAGNPSSSMI SSSILMTAAD CGGSGGGDHL FSSYPSMHRS HGGAVSLTLG LQQQPFVSTM MHHQRPLMLH
501: GDEQEPVLPY RDLMGSQLLH DFAG

Best Arabidopsis Sequence Match ( AT5G41410.1 )
(BLAST)

001: MARDQFYGHN NHHHQEQQHQ MINQIQGFDE TNQNPTDHHH YNHQIFGSNS NMGMMIDFSK QQQIRMTSGS DHHHHHHQTS GGTDQNQLLE DSSSAMRLCN
101: VNNDFPSEVN DERPPQRPSQ GLSLSLSSSN PTSISLQSFE LRPQQQQQQG YSGNKSTQHQ NLQHTQMMMM MMNSHHQNNN NNNHQHHNHH QFQIGSSKYL
201: SPAQELLSEF CSLGVKESDE EVMMMKHKKK QKGKQQEEWD TSHHSNNDQH DQSATTSSKK HVPPLHSLEF MELQKRKAKL LSMLEELKRR YGHYREQMRV
301: AAAAFEAAVG LGGAEIYTAL ASRAMSRHFR CLKDGLVGQI QATSQALGER EEDNRAVSIA ARGETPRLRL LDQALRQQKS YRQMTLVDAH PWRPQRGLPE
401: RAVTTLRAWL FEHFLHPYPS DVDKHILARQ TGLSRSQVSN WFINARVRLW KPMIEEMYCE ETRSEQMEIT NPMMIDTKPD PDQLIRVEPE SLSSIVTNPT
501: SKSGHNSTHG TMSLGSTFDF SLYGNQAVTY AGEGGPRGDV SLTLGLQRND GNGGVSLALS PVTAQGGQLF YGRDHIEEGP VQYSASMLDD DQVQNLPYRN
601: LMGAQLLHDI V

Arabidopsis Description

BEL1Homeobox protein BEL1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q38897]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.