CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH02013
KRH03996
KRH05245
KRH11062
KRH11492
KRH21207
KRH27981
KRH36506
KRH42918
KRH51140
KRH57265
KRH59028
KRH61471
KRH73381
KRH77464

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41410.1	KRH02013	AT1G62360.1	11701881
AT5G41410.1	KRH11492	AT1G62360.1	11701881
AT5G41410.1	KRH36506	AT1G62360.1	11701881
AT5G41410.1	KRH51140	AT1G62360.1	11701881
AT5G41410.1	KRH73381	AT1G62360.1	11701881
AT5G41410.1	KRH02013	AT1G62360.1	15781858
AT5G41410.1	KRH11492	AT1G62360.1	15781858
AT5G41410.1	KRH36506	AT1G62360.1	15781858
AT5G41410.1	KRH51140	AT1G62360.1	15781858
AT5G41410.1	KRH73381	AT1G62360.1	15781858
AT5G41410.1	KRH02013	AT1G62360.1	17873098
AT5G41410.1	KRH11492	AT1G62360.1	17873098
AT5G41410.1	KRH36506	AT1G62360.1	17873098
AT5G41410.1	KRH51140	AT1G62360.1	17873098
AT5G41410.1	KRH73381	AT1G62360.1	17873098
AT5G41410.1	KRH03996	AT1G62990.1	11701881
AT5G41410.1	KRH27981	AT1G62990.1	11701881
AT5G41410.1	KRH57265	AT1G62990.1	11701881
AT5G41410.1	KRH77464	AT1G62990.1	11701881
AT5G41410.1	KRH61471	AT4G08150.1	11701881
AT5G41410.1	KRH61471	AT4G08150.1	15781858
AT5G41410.1	KRH61471	AT4G08150.1	17873098
AT5G41410.1	KRH11062	AT4G18830.1	15781858
AT5G41410.1	KRH21207	AT4G18830.1	15781858
AT5G41410.1	KRH42918	AT4G18830.1	15781858
AT5G41410.1	KRH59028	AT4G18830.1	15781858
AT5G41410.1	KRH05245	AT5G11060.1	11701881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41225	Soybean	nucleus	87.72	86.22
KRH27902	Soybean	nucleus	71.02	70.25
KRH77572	Soybean	nucleus	70.71	69.5
VIT_02s0025g00200.t01	Wine grape	nucleus	67.09	65.94
GSMUA_Achr1P03680_001	Banana	nucleus	26.77	57.43
PGSC0003DMT400032122	Potato	nucleus	55.28	55.45
CDY45383	Canola	nucleus	22.2	53.61
Solyc08g081400.2.1	Tomato	nucleus	54.33	53.57
GSMUA_Achr4P04480_001	Banana	nucleus	31.97	48.22
GSMUA_Achr2P04310_001	Banana	nucleus	42.2	48.03
GSMUA_Achr1P06400_001	Banana	nucleus	38.9	47.87
AT5G41410.1	Thale cress	nucleus	45.83	47.63
CDY44476	Canola	nucleus	42.52	47.54
Bra025497.1-P	Field mustard	nucleus	44.09	47.22
GSMUA_Achr9P18740_001	Banana	nucleus	41.26	45.49
TraesCS7D01G019800.1	Wheat	nucleus	30.24	39.75
GSMUA_Achr4P12180_001	Banana	nucleus	32.6	39.58
TraesCS7A01G022600.1	Wheat	nucleus	29.92	39.34
Os06t0108900-02	Rice	nucleus	32.44	38.87
TraesCS1D01G193800.1	Wheat	nucleus	35.91	38.71
TraesCS1B01G191800.1	Wheat	nucleus	35.59	38.63
Zm00001d035907_P001	Maize	nucleus	30.24	38.55
Os03t0124000-01	Rice	nucleus	35.75	38.41
TraesCS1A01G183400.1	Wheat	nucleus	35.43	38.4
TraesCS4A01G469900.1	Wheat	nucleus	29.92	38.31
HORVU1Hr1G049760.1	Barley	nucleus	35.91	38.26
EER89055	Sorghum	nucleus	31.5	38.17
KXG40303	Sorghum	nucleus	37.01	37.54
Zm00001d027435_P001	Maize	nucleus	36.38	37.26
TraesCS4D01G340700.1	Wheat	nucleus	35.59	36.87
Os10t0534900-01	Rice	nucleus	34.02	36.86
TraesCS5A01G514700.1	Wheat	nucleus	35.12	36.86
TraesCS4B01G345600.1	Wheat	nucleus	35.43	36.82
HORVU4Hr1G084590.2	Barley	nucleus	34.17	34.89
EER92018	Sorghum	nucleus	33.07	33.12
KRH26689	Soybean	nucleus	25.35	31.14
Zm00001d029736_P001	Maize	nucleus, plastid	33.23	30.67
KRH61118	Soybean	nucleus	20.94	30.23
KRH28575	Soybean	nucleus	33.54	30.21
KRH76894	Soybean	nucleus	33.54	30.0
KRH51793	Soybean	nucleus	20.94	29.75
KRH69971	Soybean	nucleus	31.02	29.23
KRH00065	Soybean	nucleus	25.51	28.27
KRH32854	Soybean	nucleus	28.82	27.69
KRH51485	Soybean	nucleus	24.09	27.52
KRH08329	Soybean	nucleus	33.39	27.28
KRH75724	Soybean	nucleus	26.14	27.26
KRH51792	Soybean	nucleus	27.24	27.16
KRH72182	Soybean	nucleus	28.35	27.11
KRH15136	Soybean	nucleus	27.09	27.04
KRH65931	Soybean	nucleus	25.98	26.74
KRH05875	Soybean	nucleus	25.67	26.68
KRH61114	Soybean	nucleus	27.09	26.63
KRH22635	Soybean	nucleus	29.13	26.35
KRG96259	Soybean	nucleus	28.19	26.32
KRH68008	Soybean	nucleus	28.03	26.21
KRH60794	Soybean	nucleus	27.09	25.98
KRH25319	Soybean	nucleus	28.66	24.56
KRG88864	Soybean	nucleus	28.35	23.56
KRH30618	Soybean	nucleus	28.03	23.18
KRH25064	Soybean	nucleus	27.56	23.03
KRH22860	Soybean	nucleus	28.35	22.9
KRH52190	Soybean	nucleus	19.53	22.59
KRH26495	Soybean	nucleus	28.03	22.42
KRH05496	Soybean	nucleus	18.9	21.02
KRH61499	Soybean	nucleus	18.43	20.35

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100787954	MapMan:15.5.3.5	EMBL:ACUP02003345	ncoils:Coil	EnsemblPlantsGene:GLYMA_05G210300
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	UniProt:I1K6F5
InterPro:IPR001356	ProteinID:KRH59950.1	EnsemblPlants:KRH59951	ProteinID:KRH59951	ProteinID:KRH59951.1	ProteinID:KRH59952.1
PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF66
SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI0002339859	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:+:39221307..39225275

Molecular Weight (calculated)

71179.8 Da

IEP (calculated)

6.648

GRAVY (calculated)

-0.590

Length

635 amino acids

Sequence
(BLAST)

001: MARQLCEEKS KDMASSSHGL FYSDVSSNNP TIQPHLMNHI QGFVTDPDMF NLTTGMDMIG FSKNLQQHSE SNGVMMWKSF FGKPGQLAGS SSSKTMNGSC
101: SNFYNQHADA YNTNKQDFTS GISETSSENL VVGGAHDSAP WQENRLMVDD SSLRCVFPCE GNQRPSQGLS LSLSSTNPLS IGLQSFELRQ TSHHQHLSDF
201: VSREGFFGKP VNAQQQQQQM LQDGYLSPSK GANIYQGHFL IKNSKFLVPA QVLLNEFCSL GTKENDVLPK QKCSQKNKQW EEGNSGGGSS KNHSLSSLEY
301: VELQKRKTKL LAMLEEVDRR YKHYRNQMKA VVSSFEAVAG NGAATVYSAL ALKAMSRHFR CLKDGIMDEI EATRKGMGEK DHVAAVPGTT RGETPRLRIV
401: DQSLRQQRAF QQISIMETHP WRPQRGLPER SVSVLRAWLF EHFLHPYPSD VDKHILARQA GLSRRQVSNW FINARVRLWK PMVEEMYLEE EKEQENDVAS
501: SDINVPEEDE KPTQEAPLLR IDSECMSSIV NDVTKSGKTI QNDNQMDAFG SVELDFSSYT HAHHSSGVSL TLGLQQHGES GVSLAFLPAA TQSSMFYPRD
601: QIQECQTVQY SLLDAEGQNM PFRNVMGTHL LHDLV

Best Arabidopsis Sequence Match ( AT2G23760.1 )
(BLAST)

001: MGLATTTSSM SQDYHHHQGI FSFSNGFHRS SSTTHQEEVD ESAVVSGAQI PVYETAGMLS EMFAYPGGGG GGSGGEILDQ STKQLLEQQN RHNNNNNSTL
101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL
201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP
301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR
401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE
501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV
601: SLTLGLRHSG NIPDKNTSFS VRDFGDF

Arabidopsis Description

BLH4BEL1-like homeodomain 4 [Source:TAIR;Acc:AT2G23760]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.