CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11062	Soybean	plastid	79.95	89.46
VIT_10s0003g01750.t01	Wine grape	nucleus	24.64	52.31
KRH42918	Soybean	plastid	52.17	52.3
KRH59028	Soybean	plastid	51.21	51.83
KRH50362	Soybean	cytosol	7.97	26.4
GSMUA_Achr6P31770_001	Banana	nucleus	18.12	25.6
GSMUA_Achr9P05640_001	Banana	nucleus	17.63	25.26
TraesCS3B01G324100.1	Wheat	nucleus	16.67	23.71
HORVU3Hr1G071640.1	Barley	nucleus	16.43	23.53
TraesCS3D01G289200.1	Wheat	nucleus	16.43	22.97
TraesCS3A01G289400.1	Wheat	nucleus	16.43	22.97
Bra020989.1-P	Field mustard	mitochondrion	17.63	22.74
CDY09258	Canola	mitochondrion	17.39	22.5
CDX99420	Canola	mitochondrion	17.63	22.32
TraesCS1D01G340300.1	Wheat	nucleus	18.6	22.32
AT4G18830.1	Thale cress	mitochondrion, nucleus, plastid	18.6	22.06
TraesCS1A01G338100.1	Wheat	cytosol	18.12	21.87
CDX78899	Canola	mitochondrion	17.15	21.78
Bra013354.1-P	Field mustard	mitochondrion	17.15	21.78
Zm00001d038714_P001	Maize	nucleus	16.43	21.59
KRH00468	Soybean	nucleus	19.08	21.53
EES19813	Sorghum	nucleus	17.39	21.49
TraesCS1B01G350500.1	Wheat	cytosol, mitochondrion, nucleus	17.87	21.45
Zm00001d043470_P001	Maize	mitochondrion, nucleus	17.39	21.3
Os05t0517100-00	Rice	mitochondrion	16.18	21.2
KRH40761	Soybean	nucleus	19.57	20.98
HORVU1Hr1G076490.1	Barley	nucleus	17.87	20.85
CDY01560	Canola	nucleus	17.87	20.79
EES01480	Sorghum	nucleus	17.63	20.62
KRH17171	Soybean	nucleus, plastid	18.6	20.59
KRH76106	Soybean	nucleus	19.08	20.52
Solyc02g072030.1.1	Tomato	mitochondrion, nucleus, plastid	18.6	20.42
KRH65447	Soybean	nucleus	18.84	20.16
Bra012575.1-P	Field mustard	nucleus	17.87	20.0
KRH32810	Soybean	mitochondrion	8.45	19.77
KRG98156	Soybean	nucleus	18.36	19.74
KRH72226	Soybean	mitochondrion	8.21	19.54
PGSC0003DMT400073252	Potato	nucleus	19.32	19.51
KRH26670	Soybean	mitochondrion	8.7	19.35
KRH72818	Soybean	nucleus	17.63	19.06
KRH22646	Soybean	mitochondrion, nucleus	8.45	19.02
KRH25295	Soybean	nucleus, plastid	8.94	18.97
KRH30374	Soybean	nucleus, plastid	8.94	18.78
KRH51868	Soybean	mitochondrion	11.35	18.65
KRH67981	Soybean	mitochondrion	7.97	17.37
KRG96237	Soybean	mitochondrion	7.97	17.28
KRH30114	Soybean	nucleus	15.22	17.21
KRH61189	Soybean	mitochondrion	10.39	16.6
CDY62560	Canola	nucleus	14.73	12.92
KRH41574	Soybean	mitochondrion, nucleus	8.45	11.95
KRH60283	Soybean	mitochondrion, nucleus	8.21	11.93

Protein Annotations

EntrezGene:102666239	MapMan:15.5.37	EMBL:ACUP02008347	ncoils:Coil	EnsemblPlantsGene:GLYMA_13G225800	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458
UniProt:K7M179	EnsemblPlants:KRH21207	ProteinID:KRH21207	ProteinID:KRH21207.1	InterPro:Ovate	InterPro:Ovate_C
PFAM:PF04844	PFscan:PS51754	PANTHER:PTHR33057	PANTHER:PTHR33057:SF10	TIGRFAMs:TIGR01568	UniParc:UPI00023CFC4D
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:33830362..33831915

Molecular Weight (calculated)

47885.9 Da

IEP (calculated)

9.507

GRAVY (calculated)

-1.014

Length

414 amino acids

Sequence
(BLAST)

001: MMKWGGRKHS SASSSSSSSS FISHASPFSW LSKFKHMRIN SESAGKTKHK AKQSGSPQYS CEYGEDKYCV KDDDGAFCRQ LPFNEESYED KKNKDIDDNV
101: KVISCSTTSC LGVRRDAKKH GKREGTLKLK EKDNIGLGEE RKLLNDGKVS KEMDEYNREK EYENLRRRFE RKAQKAFQEQ LLTLGREVEE VEFGSSKTVE
201: KEDVLQYESP RTICTPRTHA FSTSSVSKNP ILGNITEEIE KTERLSPKKM SSERQNLKQS EELKRQKQPH HLPPSRELQR RKQKPSSRVK IHSPRMVSKV
301: EICKIKALED MKKAKLKTKK KREETVEETA GLESFAVIKS SLDPKQDFRD SMIEMIIENQ ISKPEEMEDL LACYLTLNAD EYHDLIIKVF RQVWSDMTRG
401: GLGIKLNLQW SYYE

Best Arabidopsis Sequence Match ( AT4G18830.1 )
(BLAST)

001: MMRWGRKKPV SSSSSSGLSR ALPVSWFSKL SGSSDLKPAK EKKQDEKASQ NISVKTSLSS TTRRSDIHEN SKRFQRVSVE KENSATRSAD KESNEKFEEI
101: MSSVRKKVRD FQKETCGFLE VEAMDRDNGT VILTPRIQVN RDKQRCERRD QRLLEQKPKR SEQDAGVKVK KPARRTGTGG YSREDSVILG HTITKPAHQW
201: EKLKEVKLRE VKLKADQQRK SLYLKRELNR IGTKENNKVR VFSPRASEKC RVKAIEDLKK AKQRAREHEL LIETADGGME NESFAVVKCS SDPQKDFRDS
301: MIEMIMENGI NHPEELKELL VCYLRLNTDE YHDMIISVFQ QVHNDFNFH

Arabidopsis Description

OFP5Transcription repressor OFP5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZN1]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.