Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G58360.1 | KRH03996 | AT1G62990.1 | 15781858 |
| AT5G58360.1 | KRH27981 | AT1G62990.1 | 15781858 |
| AT5G58360.1 | KRH57265 | AT1G62990.1 | 15781858 |
| AT5G58360.1 | KRH77464 | AT1G62990.1 | 15781858 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH30114 | Soybean | nucleus | 87.79 | 92.35 |
| KRH72818 | Soybean | nucleus | 74.03 | 74.41 |
| KRH17171 | Soybean | nucleus, plastid | 71.17 | 73.26 |
| CDY32706 | Canola | cytosol | 8.31 | 64.0 |
| CDY02814 | Canola | cytosol | 8.05 | 62.0 |
| PGSC0003DMT400078126 | Potato | nucleus | 40.26 | 44.16 |
| Solyc06g082460.1.1 | Tomato | nucleus | 39.48 | 43.3 |
| CDY32990 | Canola | nucleus | 30.39 | 40.91 |
| CDY43860 | Canola | nucleus | 30.65 | 40.69 |
| GSMUA_Achr3P09850_001 | Banana | mitochondrion | 32.99 | 40.06 |
| AT5G58360.1 | Thale cress | nucleus | 30.39 | 39.53 |
| KRH40761 | Soybean | nucleus | 38.96 | 38.86 |
| KRH65447 | Soybean | nucleus | 38.96 | 38.76 |
| KRH00468 | Soybean | nucleus | 36.88 | 38.69 |
| KRH76106 | Soybean | nucleus | 36.88 | 36.88 |
| Bra002657.1-P | Field mustard | nucleus | 31.69 | 35.67 |
| KRH50362 | Soybean | cytosol | 11.43 | 35.2 |
| KRH26670 | Soybean | mitochondrion | 12.73 | 26.34 |
| KRH67981 | Soybean | mitochondrion | 12.73 | 25.79 |
| KRH22646 | Soybean | mitochondrion, nucleus | 12.21 | 25.54 |
| KRH72226 | Soybean | mitochondrion | 11.17 | 24.71 |
| KRG96237 | Soybean | mitochondrion | 12.21 | 24.61 |
| KRH32810 | Soybean | mitochondrion | 11.17 | 24.29 |
| KRH25295 | Soybean | nucleus, plastid | 11.95 | 23.59 |
| KRH30374 | Soybean | nucleus, plastid | 11.95 | 23.35 |
| KRH51868 | Soybean | mitochondrion | 15.06 | 23.02 |
| KRH61189 | Soybean | mitochondrion | 14.55 | 21.62 |
| KRH60283 | Soybean | mitochondrion, nucleus | 15.32 | 20.7 |
| KRH41574 | Soybean | mitochondrion, nucleus | 15.58 | 20.48 |
| KRH11062 | Soybean | plastid | 18.7 | 19.46 |
| KRH21207 | Soybean | plastid | 19.74 | 18.36 |
| KRH42918 | Soybean | plastid | 18.44 | 17.19 |
| KRH59028 | Soybean | plastid | 17.92 | 16.87 |
Protein Annotations
| EntrezGene:100798120 | MapMan:15.5.37 | UniProt:A0A0R0EW95 | EMBL:ACUP02010848 | InterPro:DNA_bnd_dom_ovate | EnsemblPlantsGene:GLYMA_18G054200 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | EnsemblPlants:KRG98156 |
| ProteinID:KRG98156 | ProteinID:KRG98156.1 | InterPro:Ovate | InterPro:Ovate_C | PFAM:PF04844 | PFAM:PF13724 |
| PFscan:PS51754 | PANTHER:PTHR33057 | PANTHER:PTHR33057:SF38 | TIGRFAMs:TIGR01568 | UniParc:UPI000233E88C | SEG:seg |
Description
hypothetical protein
Coordinates
chr18:-:4710561..4711718
Molecular Weight (calculated)
43587.5 Da
IEP (calculated)
9.661
GRAVY (calculated)
-0.655
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNNRFRLSD MMPNAWFYKL KDMSKSRKRN GPHVMKNKVA SPTTSQRSQP RYSHYFSIEP NIAGKLYNSP IFYTKHSDNT FTDSPRRSSK RRAGRKTIYK
101: PSPTVVSSPV IESFGCHSTN NWIKPNQLQS PDYYLSSIEI SSSESNLNDE YVSSESECDK FTIPDLLNGV ASECSCRVSS STNDIIIDMK NEPFNGNSEN
201: LDGFDTISQL GLAPILTKPV KFDDKVIETT ELRRSAKFDE LKSHQSLSVI VSKEECSRTK RERKTSPVAR VSSANSPGIK LRVNSPKLAS KKVQAYARRS
301: VSSRACKASM NSGFPEGFAV VKSSLDPQRD FRESMVEMIV ENNIHASKDL ENLLACYLSL NSREYHDLIV KAFEQIWYDM AQLRM
101: PSPTVVSSPV IESFGCHSTN NWIKPNQLQS PDYYLSSIEI SSSESNLNDE YVSSESECDK FTIPDLLNGV ASECSCRVSS STNDIIIDMK NEPFNGNSEN
201: LDGFDTISQL GLAPILTKPV KFDDKVIETT ELRRSAKFDE LKSHQSLSVI VSKEECSRTK RERKTSPVAR VSSANSPGIK LRVNSPKLAS KKVQAYARRS
301: VSSRACKASM NSGFPEGFAV VKSSLDPQRD FRESMVEMIV ENNIHASKDL ENLLACYLSL NSREYHDLIV KAFEQIWYDM AQLRM
001: MRNYKLRLSV MSPSEWFHKL KNMTKPRKKH SLPLYSINTT KKRKPSSESK SLPYSSTSYF FNRSRSRTSF ESRILQISPR NSLHNIQSKR KTVYKPSPPS
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK
Arabidopsis Description
OFP4Transcription repressor OFP4 [Source:UniProtKB/Swiss-Prot;Acc:F4HNU8]
SUBAcon: [mitochondrion,plastid,nucleus]
SUBAcon: [mitochondrion,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.