Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT5G58360.1 | KRH03996 | AT1G62990.1 | 15781858 |
AT5G58360.1 | KRH27981 | AT1G62990.1 | 15781858 |
AT5G58360.1 | KRH57265 | AT1G62990.1 | 15781858 |
AT5G58360.1 | KRH77464 | AT1G62990.1 | 15781858 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH72818 | Soybean | nucleus | 92.25 | 90.08 |
KRG98156 | Soybean | nucleus | 73.26 | 71.17 |
KRH30114 | Soybean | nucleus | 67.65 | 69.13 |
CDY32706 | Canola | cytosol | 9.09 | 68.0 |
CDY02814 | Canola | cytosol | 8.82 | 66.0 |
PGSC0003DMT400078126 | Potato | nucleus | 39.04 | 41.6 |
AT5G58360.1 | Thale cress | nucleus | 31.82 | 40.2 |
Solyc06g082460.1.1 | Tomato | nucleus | 37.7 | 40.17 |
CDY43860 | Canola | nucleus | 30.75 | 39.66 |
CDY32990 | Canola | nucleus | 30.21 | 39.51 |
KRH65447 | Soybean | nucleus | 39.57 | 38.24 |
KRH76106 | Soybean | nucleus | 39.04 | 37.92 |
KRH40761 | Soybean | nucleus | 38.77 | 37.56 |
KRH00468 | Soybean | nucleus | 36.63 | 37.33 |
GSMUA_Achr3P09850_001 | Banana | mitochondrion | 31.02 | 36.59 |
Bra002657.1-P | Field mustard | nucleus | 31.82 | 34.8 |
KRH50362 | Soybean | cytosol | 10.43 | 31.2 |
KRH26670 | Soybean | mitochondrion | 12.57 | 25.27 |
KRH67981 | Soybean | mitochondrion | 12.57 | 24.74 |
KRH72226 | Soybean | mitochondrion | 11.5 | 24.71 |
KRH22646 | Soybean | mitochondrion, nucleus | 12.03 | 24.46 |
KRH32810 | Soybean | mitochondrion | 11.5 | 24.29 |
KRH25295 | Soybean | nucleus, plastid | 12.3 | 23.59 |
KRG96237 | Soybean | mitochondrion | 12.03 | 23.56 |
KRH30374 | Soybean | nucleus, plastid | 12.3 | 23.35 |
KRH51868 | Soybean | mitochondrion | 14.71 | 21.83 |
KRH60283 | Soybean | mitochondrion, nucleus | 15.51 | 20.35 |
KRH41574 | Soybean | mitochondrion, nucleus | 15.78 | 20.14 |
KRH61189 | Soybean | mitochondrion | 13.64 | 19.69 |
KRH11062 | Soybean | plastid | 19.25 | 19.46 |
KRH21207 | Soybean | plastid | 20.59 | 18.6 |
KRH42918 | Soybean | plastid | 19.79 | 17.92 |
KRH59028 | Soybean | plastid | 18.98 | 17.36 |
Protein Annotations
EntrezGene:100797854 | MapMan:15.5.37 | EMBL:ACUP02009056 | ncoils:Coil | InterPro:DNA_bnd_dom_ovate | EnsemblPlantsGene:GLYMA_14G203600 |
GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 | UniProt:I1MBK4 | InterPro:IPR006458 |
EnsemblPlants:KRH17171 | ProteinID:KRH17171 | ProteinID:KRH17171.1 | InterPro:Ovate | InterPro:Ovate_C | PFAM:PF04844 |
PFAM:PF13724 | PFscan:PS51754 | PANTHER:PTHR33057 | PANTHER:PTHR33057:SF38 | TIGRFAMs:TIGR01568 | UniParc:UPI000233AF99 |
SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr14:+:46826523..46827888
Molecular Weight (calculated)
42441.0 Da
IEP (calculated)
8.796
GRAVY (calculated)
-0.665
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNNKFKLSD MIPNAWFYKL KDMSRSRKRN GSHVMKSKVS SPTTSQRSLP RYSQYFSTEP IRAGKLYNTP IHTKDLDLPF TDSPRRSSKR RARRKTIYKP
101: SPTVVPSSGY DSPNHWIKPC QVQSPDYDVS SAESSSESDL HEYAYSESEC DSFSVPDLLN GVDTNCSCRV SSSTNDIIID MNSESFIGNP EKQDGFDAIS
201: QLGLAPILTR PMKFDDKVIE AAELRSSTDL DQLQDDQSFS IEILKEECNR IQRRRKSSHR KPFANSAGIR LRVHSPKLAS RKIQACARSV SPISSKAPRS
301: TGFLDGFAVV KSSFDPQSDF RESMLEMIVE NNIRASKDLE DLLACYLSLN SSEYRDLIVK AFEQIWFDMT QLRM
101: SPTVVPSSGY DSPNHWIKPC QVQSPDYDVS SAESSSESDL HEYAYSESEC DSFSVPDLLN GVDTNCSCRV SSSTNDIIID MNSESFIGNP EKQDGFDAIS
201: QLGLAPILTR PMKFDDKVIE AAELRSSTDL DQLQDDQSFS IEILKEECNR IQRRRKSSHR KPFANSAGIR LRVHSPKLAS RKIQACARSV SPISSKAPRS
301: TGFLDGFAVV KSSFDPQSDF RESMLEMIVE NNIRASKDLE DLLACYLSLN SSEYRDLIVK AFEQIWFDMT QLRM
001: MKQKMGTHKF RFSDMMPHSW LYKLKGMSRS SRKHHLSSPK HLSSADASSS RKLRDPLRRL SSTAHHPQAS NSPPKSSSFK RKIKRKTVYK PSSRLKLSTS
101: SSLNHRSKSS SSANAISDSA VGSFLDRVSS PSDQNFVHDP EPHSSIDIKD ELSVRKLDDV PEDPSVSPNL SPETAKEPPF EMMTQQKLKK PKAHSSGIKI
201: PTKIVRKKKK ERTSQVSKKK GVVKSFAIVL SSVDPEKDFR ESMVEMIMEN KMREQKDLED LLACYLSLNS SEYHDVIIKA FENTWLHLTQ GLSISL
101: SSLNHRSKSS SSANAISDSA VGSFLDRVSS PSDQNFVHDP EPHSSIDIKD ELSVRKLDDV PEDPSVSPNL SPETAKEPPF EMMTQQKLKK PKAHSSGIKI
201: PTKIVRKKKK ERTSQVSKKK GVVKSFAIVL SSVDPEKDFR ESMVEMIMEN KMREQKDLED LLACYLSLNS SEYHDVIIKA FENTWLHLTQ GLSISL
Arabidopsis Description
OFP3Transcription repressor OFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVL4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.