CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76106	Soybean	nucleus	89.92	90.39
KRH00468	Soybean	nucleus	57.88	61.04
KRH40761	Soybean	nucleus	60.47	60.62
Solyc09g018200.1.1	Tomato	nucleus	35.92	55.38
PGSC0003DMT400011286	Potato	nucleus	37.21	50.7
Solyc10g076180.1.1	Tomato	nucleus	37.73	45.48
KRH72818	Soybean	nucleus	40.05	40.47
KRH17171	Soybean	nucleus, plastid	38.24	39.57
KRG98156	Soybean	nucleus	38.76	38.96
KRH30114	Soybean	nucleus	35.92	37.98
KRH50362	Soybean	cytosol	9.82	30.4
KRH67981	Soybean	mitochondrion	11.89	24.21
KRH25295	Soybean	nucleus, plastid	12.14	24.1
KRG96237	Soybean	mitochondrion	11.63	23.56
KRH30374	Soybean	nucleus, plastid	11.89	23.35
KRH60283	Soybean	mitochondrion, nucleus	17.05	23.16
KRH26670	Soybean	mitochondrion	11.11	23.12
KRH72226	Soybean	mitochondrion	10.34	22.99
KRH22646	Soybean	mitochondrion, nucleus	10.85	22.83
KRH32810	Soybean	mitochondrion	10.34	22.6
KRH41574	Soybean	mitochondrion, nucleus	16.8	22.18
KRH61189	Soybean	mitochondrion	13.7	20.46
KRH11062	Soybean	plastid	19.38	20.27
KRH51868	Soybean	mitochondrion	13.18	20.24
KRH21207	Soybean	plastid	20.16	18.84
KRH42918	Soybean	plastid	18.6	17.43
KRH59028	Soybean	plastid	18.35	17.36

Protein Annotations

EntrezGene:100803805	MapMan:15.5.37	EMBL:ACUP02001355	InterPro:DNA_bnd_dom_ovate	EnsemblPlantsGene:GLYMA_03G036600	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	UniProt:I1JKY5	InterPro:IPR006458	EnsemblPlants:KRH65447
ProteinID:KRH65447	ProteinID:KRH65447.1	InterPro:Ovate	InterPro:Ovate_C	PFAM:PF04844	PFAM:PF13724
PFscan:PS51754	PANTHER:PTHR33057	PANTHER:PTHR33057:SF22	TIGRFAMs:TIGR01568	UniParc:UPI000233A04C	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:4432910..4435002

Molecular Weight (calculated)

44109.9 Da

IEP (calculated)

10.611

GRAVY (calculated)

-1.014

Length

387 amino acids

Sequence
(BLAST)

001: MGNHRFKLSD MIPNAWFYKL RDMGKGRDSR KQNTTPSRKK KQTSPPSTTH SSIRNQPHQQ NNNNPRKSYY FTRDLKISPS NTPKTISPPR KSTKQRTKKR
101: TPTRTPKLVS SSGCSCRTTL ESMWTKSDSP QDEHSSSSPF DTSPESQSPE FRTDRVLLPF SSSFDEMVSL STTSCASCRL NTNKNKNNTT NDTIIDVDKN
201: SIARKDNKLD GYYNYNTNNG YDDTFSELEL PPIITKPSSK LLKKRELKQG SLKVRIVKEQ DSAMKEQRNH HGSLRRLSVS SPGVRLRIHS PRIAGRRGRK
301: SVSSSSTTTS SGSRRSLSES FAVVKSSFDP QKDFMESMVE MIVENNIRAS KDLEDLLACY LSLNSDEYHD LIIKVFKQIW FDLTQPR

Best Arabidopsis Sequence Match ( AT5G01840.1 )
(BLAST)

001: MGNNYRFKLS ELIPNAWFYK LRDMSKSKKK NLQSQPNSTT SKKKHHAVPT PTSTTPLSPR PPRRPSHSSK APPSHPPRKS SGNRLRHRAT VDSKSSTTSG
101: DSTTTETGSF SPDFRSDQVL LPDESLTGSW HSPCSSKLSK TATFTPPPEL ELRPIITKTA ATARKTAVNS PAGVRLRMRS PRISVSSSAR RSGSSARRSR
201: AVVKASVDPK RDFKESMEEM IAENKIRATK DLEELLACYL CLNSDEYHAI IINVFKQIWL DLNLPPPHSK

Arabidopsis Description

OFP1Transcription repressor OFP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZW2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.