CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH03996
KRH27981
KRH57265
KRH61471
KRH77464

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52525.1	KRH03996	AT1G62990.1	15781858
AT3G52525.1	KRH27981	AT1G62990.1	15781858
AT3G52525.1	KRH57265	AT1G62990.1	15781858
AT3G52525.1	KRH77464	AT1G62990.1	15781858
AT3G52525.1	KRH61471	AT4G08150.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67981	Soybean	mitochondrion	90.58	91.05
KRH32810	Soybean	mitochondrion	62.3	67.23
KRH72226	Soybean	mitochondrion	60.21	66.09
VIT_08s0007g02550.t01	Wine grape	mitochondrion, plastid	59.16	60.75
Solyc01g007800.2.1	Tomato	mitochondrion	53.4	56.04
PGSC0003DMT400042334	Potato	mitochondrion	53.4	55.43
Solyc10g082050.1.1	Tomato	mitochondrion	50.26	53.93
PGSC0003DMT400072347	Potato	mitochondrion, plastid	50.26	50.79
AT3G52525.1	Thale cress	plastid	38.74	46.54
AT2G36026.1	Thale cress	nucleus, plastid	43.98	45.9
CDX75076	Canola	nucleus	43.98	45.16
Bra005303.1-P	Field mustard	mitochondrion, plastid	43.46	44.62
CDY43753	Canola	nucleus	42.93	44.09
Bra017266.1-P	Field mustard	nucleus	42.93	44.09
GSMUA_Achr9P02660_001	Banana	mitochondrion	33.51	32.32
KRH26670	Soybean	mitochondrion	30.89	31.72
KRH22646	Soybean	mitochondrion, nucleus	30.37	31.52
KRH50362	Soybean	cytosol	19.9	30.4
KRH30374	Soybean	nucleus, plastid	30.89	29.95
KRH25295	Soybean	nucleus, plastid	30.37	29.74
GSMUA_Achr6P19470_001	Banana	nucleus	28.27	29.03
GSMUA_Achr6P18350_001	Banana	mitochondrion	31.94	28.24
GSMUA_AchrUn_...	Banana	mitochondrion	31.94	27.48
HORVU3Hr1G083700.1	Barley	plastid	30.89	26.34
TraesCS3A01G376000.1	Wheat	plastid	30.89	26.34
TraesCS3B01G408300.1	Wheat	plastid	30.89	26.11
GSMUA_Achr5P20250_001	Banana	plastid	28.27	26.09
Os01t0864000-01	Rice	mitochondrion, plastid	30.89	25.88
TraesCS3D01G368500.1	Wheat	plastid	30.37	25.55
EES03931	Sorghum	plastid	31.41	25.42
TraesCS1D01G191500.1	Wheat	mitochondrion	31.94	24.8
TraesCS1B01G193300.1	Wheat	mitochondrion	31.94	24.8
HORVU1Hr1G049440.1	Barley	mitochondrion	31.94	24.5
GSMUA_Achr11P...	Banana	plastid	21.99	24.42
TraesCS1A01G185400.1	Wheat	mitochondrion	31.41	24.39
Zm00001d042752_P001	Maize	nucleus, plastid	31.41	24.39
Zm00001d012282_P001	Maize	nucleus, plastid	31.41	24.29
GSMUA_Achr1P03740_001	Banana	plastid	21.47	23.56
Zm00001d029718_P001	Maize	mitochondrion	31.94	23.46
Os10t0532600-01	Rice	mitochondrion	31.94	23.19
TraesCS1A01G275500.1	Wheat	nucleus, plastid	27.23	22.71
EES18304	Sorghum	nucleus, plastid	27.23	22.71
EER94592	Sorghum	mitochondrion	33.51	22.7
TraesCS1B01G284700.1	Wheat	plastid	26.7	22.57
Zm00001d038283_P001	Maize	nucleus	26.7	22.37
TraesCS1D01G275100.1	Wheat	plastid	26.7	22.27
HORVU1Hr1G074020.1	Barley	nucleus, plastid	26.18	22.03
GSMUA_Achr8P12190_001	Banana	plastid	22.51	21.94
Zm00001d047346_P001	Maize	mitochondrion	30.89	21.45
KRH60283	Soybean	mitochondrion, nucleus	31.94	21.4
Os02t0679700-01	Rice	plastid	31.41	21.35
KRH41574	Soybean	mitochondrion, nucleus	32.46	21.16
TraesCS6D01G239400.1	Wheat	plastid	32.46	20.95
TraesCS6A01G258000.1	Wheat	plastid	30.89	20.21
TraesCS6B01G267100.1	Wheat	plastid	31.41	20.13
Os05t0440900-00	Rice	plastid	24.08	19.91
HORVU6Hr1G065900.1	Barley	mitochondrion, plastid	30.89	19.87
Zm00001d017606_P001	Maize	plastid	29.84	19.52
OQU85631	Sorghum	plastid	31.41	19.48
KRH51868	Soybean	mitochondrion	24.61	18.65
KRH61189	Soybean	mitochondrion	24.61	18.15
EER92948	Sorghum	plastid	24.08	18.04
TraesCS4D01G316300.1	Wheat	nucleus, plastid	20.94	17.7
Zm00001d027453_P001	Maize	plastid	22.51	17.41
TraesCS5A01G492400.1	Wheat	nucleus	20.42	16.74
Os04t0577700-01	Rice	nucleus	30.89	16.08
TraesCS2B01G415000.1	Wheat	mitochondrion	30.89	15.78
TraesCS2D01G394400.1	Wheat	mitochondrion	30.89	15.45
HORVU4Hr1G083150.1	Barley	plastid	20.42	15.41
TraesCS2A01G396600.1	Wheat	mitochondrion, plastid	30.37	15.3
Zm00001d026061_P001	Maize	cytosol, mitochondrion, nucleus, plastid	29.84	14.88
Zm00001d002594_P001	Maize	cytosol, mitochondrion, nucleus, plastid	30.89	14.86
EES11304	Sorghum	plastid	31.41	14.67
HORVU2Hr1G094240.1	Barley	cytosol, mitochondrion, plastid	25.65	13.65
Os03t0126450-00	Rice	nucleus	23.04	13.06
TraesCS4B01G319700.1	Wheat	plastid	20.42	12.79
KRG98156	Soybean	nucleus	24.61	12.21
KRH17171	Soybean	nucleus, plastid	23.56	12.03
KRH76106	Soybean	nucleus	23.56	11.69
KRH65447	Soybean	nucleus	23.56	11.63
KRH72818	Soybean	nucleus	23.04	11.49
KRH30114	Soybean	nucleus	21.99	11.48
KRH40761	Soybean	nucleus	23.04	11.4
Os01t0831800-00	Rice	plastid	16.23	11.19
KRH00468	Soybean	nucleus	21.47	11.17
KRH11062	Soybean	plastid	16.23	8.38
KRH21207	Soybean	plastid	17.28	7.97
KRH59028	Soybean	plastid	15.71	7.33
KRH42918	Soybean	plastid	15.71	7.26

Protein Annotations

EMBL:ACUP02012147	EnsemblPlants:KRG96237	EnsemblPlantsGene:GLYMA_19G197800	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C
PANTHER:PTHR33057	PANTHER:PTHR33057:SF17	PFAM:PF04844	PFscan:PS51754	ProteinID:KRG96237	ProteinID:KRG96237.1
SEG:seg	TIGRFAMs:TIGR01568	UniParc:UPI00023DD98A	UniProt:A0A0R0EPZ0	MapMan:15.5.37	:

Description

hypothetical protein

Coordinates

chr19:-:45516182..45516757

Molecular Weight (calculated)

21495.3 Da

IEP (calculated)

9.682

GRAVY (calculated)

-0.667

Length

191 amino acids

Sequence
(BLAST)

001: MSGSRKKLLL NTVSVKLGCG TCRRPNLCRI FHPKPKPKNL NNTYRKHKHS SSSSSFFSGQ WGGEDKCDST STTPTPTPTN TTFSPYVDSS HFSDSDSYVK
101: AVGGLGRAGK EGVAVEKDSD DPYLDFRHSM LQMILENEIY SKQDLRELLN CFLQLNSPHH HGVIVRAFTE IWNAVFSVRS SSHINRKPRE F

Best Arabidopsis Sequence Match ( AT2G36026.1 )
(BLAST)

001: MTTGKSKKKK MVLKAVSVVD IGCGNCKFPS LSSFFNPSPK KPRLYSSNYG HCHSSTPTTA SSSSAVPSTS HWFSDTSSSS ATPSAAAVAV EKDSDDPYLD
101: FRQSMLQMIL ENEIYSKNDL RELLHCFLSL NEPYHHGIII RAFSEIWDGV FSAAKRRGDV QESPLVHRHG SRASHRNHYH RSK

Arabidopsis Description

Ovate family protein [Source:UniProtKB/TrEMBL;Acc:B3H6R4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.