CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40761	Soybean	nucleus	93.19	88.6
KRH65447	Soybean	nucleus	61.04	57.88
KRH76106	Soybean	nucleus	59.13	56.36
Solyc09g018200.1.1	Tomato	nucleus	35.69	52.19
VIT_08s0058g01110.t01	Wine grape	nucleus	56.4	49.17
PGSC0003DMT400011286	Potato	nucleus	35.42	45.77
Solyc10g076180.1.1	Tomato	nucleus	36.24	41.43
KRH72818	Soybean	nucleus	38.96	37.34
KRG98156	Soybean	nucleus	38.69	36.88
KRH17171	Soybean	nucleus, plastid	37.33	36.63
KRH30114	Soybean	nucleus	36.51	36.61
KRH50362	Soybean	cytosol	10.35	30.4
KRH25295	Soybean	nucleus, plastid	12.26	23.08
KRH22646	Soybean	mitochondrion, nucleus	11.44	22.83
KRH30374	Soybean	nucleus, plastid	11.99	22.34
KRH26670	Soybean	mitochondrion	11.17	22.04
KRG96237	Soybean	mitochondrion	11.17	21.47
KRH67981	Soybean	mitochondrion	10.9	21.05
KRH32810	Soybean	mitochondrion	10.08	20.9
KRH60283	Soybean	mitochondrion, nucleus	16.08	20.7
KRH72226	Soybean	mitochondrion	9.81	20.69
KRH11062	Soybean	plastid	20.44	20.27
KRH41574	Soybean	mitochondrion, nucleus	15.8	19.8
KRH51868	Soybean	mitochondrion	13.35	19.44
KRH21207	Soybean	plastid	21.53	19.08
KRH42918	Soybean	plastid	20.44	18.16
KRH59028	Soybean	plastid	20.16	18.09
KRH61189	Soybean	mitochondrion	12.53	17.76

Protein Annotations

MapMan:15.5.37	UniProt:A0A0R0FEJ2	EMBL:ACUP02011450	InterPro:DNA_bnd_dom_ovate	EnsemblPlantsGene:GLYMA_18G215300	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	EnsemblPlants:KRH00468	ProteinID:KRH00468
ProteinID:KRH00468.1	InterPro:Ovate	InterPro:Ovate_C	PFAM:PF04844	PFAM:PF13724	PFscan:PS51754
PANTHER:PTHR33057	PANTHER:PTHR33057:SF22	TIGRFAMs:TIGR01568	UniParc:UPI0006ED8CA9	SEG:seg	:

Description

hypothetical protein

Coordinates

chr18:-:50246446..50247549

Molecular Weight (calculated)

42037.5 Da

IEP (calculated)

10.351

GRAVY (calculated)

-0.972

Length

367 amino acids

Sequence
(BLAST)

001: MIPNAWFYKL KDMGKTRKQT PTTHSRKKKQ PSPASTQKAS KPKQPHQYNL RKSYYFTREL TPNDRIYSSP TPTNNQNAKY TNSLEPPRKS SKQRLKKRTS
101: RTSSPKLVVV SNNNNSSSPN DSSTESEYPD PEFRTDRVLP TESFDETVPW ANSCACRVHS NAKDIIIDVD NNSIARKDGK LEGYEYECDS FSDLVLPPIV
201: TKPAIFNDLL SDVKKKETKP RSKMAAHEEP NLNKGPLRVK IVKEDTSSMK EHKNTYGRRF SVSSPGVRLR MNSPRIASRR IQAHGRRSVS SAPRRSLSDS
301: FAVVKSSLNP QRDFRESMVE MIVQNNIRTS KDLEDLLACY LSLNSDEYHD LIIKVFKQIW FDLTDNN

Best Arabidopsis Sequence Match ( AT1G06920.1 )
(BLAST)

001: MRNYKLRLSV MSPSEWFHKL KNMTKPRKKH SLPLYSINTT KKRKPSSESK SLPYSSTSYF FNRSRSRTSF ESRILQISPR NSLHNIQSKR KTVYKPSPPS
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK

Arabidopsis Description

OFP4Transcription repressor OFP4 [Source:UniProtKB/Swiss-Prot;Acc:F4HNU8]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.