Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- nucleus 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400011286 | Potato | nucleus | 82.87 | 73.24 |
| Solyc10g076180.1.1 | Tomato | nucleus | 58.57 | 45.79 |
| KRH65447 | Soybean | nucleus | 55.38 | 35.92 |
| KRH40761 | Soybean | nucleus | 54.98 | 35.75 |
| KRH00468 | Soybean | nucleus | 52.19 | 35.69 |
| KRH76106 | Soybean | nucleus | 54.58 | 35.58 |
| VIT_08s0058g01110.t01 | Wine grape | nucleus | 50.6 | 30.17 |
| Solyc06g082460.1.1 | Tomato | nucleus | 41.43 | 29.63 |
| Solyc11g068780.1.1 | Tomato | cytosol | 15.94 | 29.2 |
| Solyc10g082050.1.1 | Tomato | mitochondrion | 15.14 | 21.35 |
| Solyc04g080210.1.1 | Tomato | mitochondrion | 22.31 | 21.05 |
| Solyc01g007800.2.1 | Tomato | mitochondrion | 14.74 | 20.33 |
| Solyc02g072030.1.1 | Tomato | mitochondrion, nucleus, plastid | 24.3 | 16.18 |
| Solyc03g034100.2.1 | Tomato | mitochondrion | 20.72 | 13.3 |
| Solyc08g068170.1.1 | Tomato | plastid | 19.92 | 9.92 |
| Solyc02g085500.2.1 | Tomato | mitochondrion | 10.76 | 9.71 |
Protein Annotations
| MapMan:15.5.37 | InterPro:DNA_bnd_dom_ovate | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 |
| InterPro:IPR006458 | UniProt:K4CS87 | InterPro:Ovate | InterPro:Ovate_C | PFAM:PF04844 | PFAM:PF13724 |
| PFscan:PS51754 | PANTHER:PTHR33057 | PANTHER:PTHR33057:SF22 | EnsemblPlantsGene:Solyc09g018200.1 | EnsemblPlants:Solyc09g018200.1.1 | TIGRFAMs:TIGR01568 |
| UniParc:UPI000276C112 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr9:-:13537071..13537826
Molecular Weight (calculated)
29145.2 Da
IEP (calculated)
11.057
GRAVY (calculated)
-0.798
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNYRFKLSD MVTSSWFYKL KDMAKSRTQI KRKQTSSSTS SSSFSIFYSS SNVQQHHRKS YYFSRTLSPN PHQSNVTPMK SSKKRKNTRR NTPKFVNSPK
101: SMILSPSHRR CNDHIFDSVS KIDLPPILTK PNKKEEKTEL KFLTVKTEQS TSPKRRISVS SSSTGVKLRT KSPRIISRRS VGEKSYAVVK SSKNPQKDFK
201: ESMVEMIVKN NIKTSKDLEE LLACYLLLNS HHYHHLIITV FKQIWFDLQL K
101: SMILSPSHRR CNDHIFDSVS KIDLPPILTK PNKKEEKTEL KFLTVKTEQS TSPKRRISVS SSSTGVKLRT KSPRIISRRS VGEKSYAVVK SSKNPQKDFK
201: ESMVEMIVKN NIKTSKDLEE LLACYLLLNS HHYHHLIITV FKQIWFDLQL K
001: MGNNYRFKLS ELIPNAWFYK LRDMSKSKKK NLQSQPNSTT SKKKHHAVPT PTSTTPLSPR PPRRPSHSSK APPSHPPRKS SGNRLRHRAT VDSKSSTTSG
101: DSTTTETGSF SPDFRSDQVL LPDESLTGSW HSPCSSKLSK TATFTPPPEL ELRPIITKTA ATARKTAVNS PAGVRLRMRS PRISVSSSAR RSGSSARRSR
201: AVVKASVDPK RDFKESMEEM IAENKIRATK DLEELLACYL CLNSDEYHAI IINVFKQIWL DLNLPPPHSK
101: DSTTTETGSF SPDFRSDQVL LPDESLTGSW HSPCSSKLSK TATFTPPPEL ELRPIITKTA ATARKTAVNS PAGVRLRMRS PRISVSSSAR RSGSSARRSR
201: AVVKASVDPK RDFKESMEEM IAENKIRATK DLEELLACYL CLNSDEYHAI IINVFKQIWL DLNLPPPHSK
Arabidopsis Description
OFP1Transcription repressor OFP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZW2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.