Factsheet for Solyc02g085500.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033048	Potato	mitochondrion, nucleus, plastid	92.09	73.14
VIT_18s0001g12310.t01	Wine grape	mitochondrion	34.17	26.03
Solyc03g034100.2.1	Tomato	mitochondrion	36.33	25.83
CDY72229	Canola	nucleus	26.26	23.25
CDY29238	Canola	nucleus, plastid	25.18	23.1
AT2G18500.1	Thale cress	mitochondrion, plastid	25.9	22.86
Bra039604.1-P	Field mustard	nucleus	25.54	22.54
CDY43893	Canola	nucleus	25.54	22.54
CDY36485	Canola	nucleus	25.18	22.44
KRH51868	Soybean	mitochondrion	17.63	19.44
CDY59540	Canola	plastid	20.14	19.38
KRH61189	Soybean	mitochondrion	17.99	19.3
Solyc04g080210.1.1	Tomato	mitochondrion	17.63	18.42
KRH50362	Soybean	cytosol	7.91	17.6
GSMUA_Achr7P25950_001	Banana	mitochondrion	19.78	16.77
GSMUA_Achr4P14010_001	Banana	nucleus	12.23	15.81
TraesCS4B01G262000.1	Wheat	mitochondrion	12.95	13.04
TraesCS4D01G262000.1	Wheat	mitochondrion	12.95	12.95
TraesCS4A01G041100.1	Wheat	mitochondrion	12.95	12.81
Os03t0197900-01	Rice	mitochondrion, plastid	12.23	12.36
Solyc10g082050.1.1	Tomato	mitochondrion	7.91	12.36
Solyc01g007800.2.1	Tomato	mitochondrion	7.91	12.09
Zm00001d000458_P001	Maize	mitochondrion, plastid	11.51	11.11
Solyc09g018200.1.1	Tomato	nucleus	9.71	10.76
Solyc06g082460.1.1	Tomato	nucleus	13.31	10.54
HORVU4Hr1G070860.1	Barley	cytosol, mitochondrion	12.23	10.12
EER92692	Sorghum	mitochondrion	11.15	9.94
Solyc11g068780.1.1	Tomato	cytosol	4.68	9.49
Bra024464.1-P	Field mustard	cytosol	2.88	9.2
Solyc10g076180.1.1	Tomato	nucleus	10.07	8.72
Solyc08g068170.1.1	Tomato	plastid	15.11	8.33
Solyc02g072030.1.1	Tomato	mitochondrion, nucleus, plastid	8.27	6.1

Protein Annotations

EnsemblPlants:Solyc02g085500.2.1	EnsemblPlantsGene:Solyc02g085500.2	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045892	InterPro:Ovate	PANTHER:PTHR33057	PANTHER:PTHR33057:SF68	SEG:seg
UniParc:UPI0002769227	UniProt:K4BB62	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr2:+:48367481..48369215

Molecular Weight (calculated)

31793.3 Da

IEP (calculated)

10.152

GRAVY (calculated)

-0.930

Length

278 amino acids

Sequence
(BLAST)

001: MGKSLKLRFS RVIASFNSCR SKNPSSLPQN PNFFPHKLTS TKHISPDFPL IDQNQNQNHR NYVPESTMIS VGCCRSEFKW EKEEKFHVVS SSFVSEEEEC
101: EEEINLALRP PLTPPRFSRI VVEKKKKKQQ RVKKTKTKSR IIRMSTSSAD EYSGILSGTN TDWDNNEEET ESLVSSSRSC YDFSSDDSST DFNPHLETIC
201: ETTTMRRRHK RNANTKRRSI KQSRPSFSSS KGRRSSVSTS SDSELPARLS VFKKLIPCSV DGKVKESFAI VKKSQDPY

Best Arabidopsis Sequence Match ( AT2G18500.1 )
(BLAST)

001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC

Arabidopsis Description

OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.