Factsheet for Solyc03g034100.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045857	Potato	mitochondrion	90.03	88.67
Bra024464.1-P	Field mustard	cytosol	11.51	51.72
KRH50362	Soybean	cytosol	13.81	43.2
AT2G18500.1	Thale cress	mitochondrion, plastid	30.18	37.46
CDY29238	Canola	nucleus, plastid	28.39	36.63
Solyc02g085500.2.1	Tomato	mitochondrion	25.83	36.33
CDY43893	Canola	nucleus	28.64	35.56
Bra039604.1-P	Field mustard	nucleus	28.64	35.56
CDY36485	Canola	nucleus	28.13	35.26
CDY72229	Canola	nucleus	28.13	35.03
KRH51868	Soybean	mitochondrion	22.25	34.52
VIT_18s0001g12310.t01	Wine grape	mitochondrion	31.71	33.97
CDY59540	Canola	plastid	25.06	33.91
KRH61189	Soybean	mitochondrion	22.25	33.59
Solyc04g080210.1.1	Tomato	mitochondrion	21.74	31.95
GSMUA_Achr4P14010_001	Banana	nucleus	16.37	29.77
Solyc11g068780.1.1	Tomato	cytosol	10.23	29.2
Solyc10g082050.1.1	Tomato	mitochondrion	13.04	28.65
Solyc01g007800.2.1	Tomato	mitochondrion	13.04	28.02
GSMUA_Achr7P25950_001	Banana	mitochondrion	19.44	23.17
Solyc09g018200.1.1	Tomato	nucleus	13.3	20.72
Solyc06g082460.1.1	Tomato	nucleus	16.11	17.95
Os03t0197900-01	Rice	mitochondrion, plastid	12.28	17.45
TraesCS4B01G262000.1	Wheat	mitochondrion	12.28	17.39
TraesCS4D01G262000.1	Wheat	mitochondrion	12.28	17.27
TraesCS4A01G041100.1	Wheat	mitochondrion	12.02	16.73
EER92692	Sorghum	mitochondrion	12.79	16.03
Zm00001d000458_P001	Maize	mitochondrion, plastid	11.76	15.97
Solyc10g076180.1.1	Tomato	nucleus	12.79	15.58
HORVU4Hr1G070860.1	Barley	cytosol, mitochondrion	12.02	13.99
Solyc08g068170.1.1	Tomato	plastid	17.9	13.89
Solyc02g072030.1.1	Tomato	mitochondrion, nucleus, plastid	12.53	13.0

Protein Annotations

EnsemblPlants:Solyc03g034100.2.1	EnsemblPlantsGene:Solyc03g034100.2	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PANTHER:PTHR33057
PANTHER:PTHR33057:SF68	PFAM:PF04844	PFscan:PS51754	SEG:seg	TIGRFAMs:TIGR01568	UniParc:UPI0002767D81
UniProt:K4BFT2	MapMan:15.5.37	:	:	:	:

Description

No Description!

Coordinates

chr3:+:5790338..5792106

Molecular Weight (calculated)

45268.7 Da

IEP (calculated)

7.121

GRAVY (calculated)

-0.882

Length

391 amino acids

Sequence
(BLAST)

001: MAKLLKFRIS KAISNSFHSC RSKDPCTLPQ HPVPSFLQNT QFITDDHLLF EEMIQQNNES QLISTHHEHF PIITSPSFKH HVSVTPITAT GQCSSRNGEA
101: FSTTSDDSHT RSPSHEFKWK KEEDKWQHFI KTNSDDDTKQ QPRRKISYSF SSDNSDNDKI LIEIKKKIST SKTNFFMMMS TTSSSSSMDE NEINFTSKKT
201: KWDYHEDIDI TNEDEENETE TFISSSRKSH VEFPDDSSLN FSHEFDTIYK NTTRRCQKKI GYSKRRDHVK NTRSRSSRDM NNIGRRSSIS TSTTSSDGEL
301: PPRLSVFKKL IPCNVEGKVK ESFAIVKKSE DPYEDFKSSM MEMILEKKIF EKNDLEQLLQ CFLSLNAKNC HGVIVEAFSE IWETLFSPNH N

Best Arabidopsis Sequence Match ( AT2G18500.1 )
(BLAST)

001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC

Arabidopsis Description

OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.