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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • nucleus 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc09g018200.1.1 Tomato nucleus 45.79 58.57
KRH76106 Soybean nucleus 45.79 38.18
KRH65447 Soybean nucleus 45.48 37.73
KRH40761 Soybean nucleus 44.55 37.05
VIT_08s0058g01110.t01 Wine grape nucleus 48.29 36.82
KRH00468 Soybean nucleus 41.43 36.24
Solyc11g068780.1.1 Tomato cytosol 14.02 32.85
Solyc06g082460.1.1 Tomato nucleus 33.64 30.77
Solyc10g082050.1.1 Tomato mitochondrion 13.08 23.6
Solyc01g007800.2.1 Tomato mitochondrion 13.08 23.08
Solyc04g080210.1.1 Tomato mitochondrion 18.07 21.8
Solyc02g072030.1.1 Tomato mitochondrion, nucleus, plastid 21.18 18.04
Solyc03g034100.2.1 Tomato mitochondrion 15.58 12.79
Solyc08g068170.1.1 Tomato plastid 18.07 11.51
Solyc02g085500.2.1 Tomato mitochondrion 8.72 10.07
Protein Annotations
MapMan:15.5.37InterPro:DNA_bnd_dom_ovateGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0045892
InterPro:IPR006458UniProt:K4D1W0InterPro:OvateInterPro:Ovate_CPFAM:PF04844PFAM:PF13724
PFscan:PS51754PANTHER:PTHR33057PANTHER:PTHR33057:SF22EnsemblPlantsGene:Solyc10g076180.1EnsemblPlants:Solyc10g076180.1.1TIGRFAMs:TIGR01568
UniParc:UPI0002769BF4SEG:seg::::
Description
No Description!
Coordinates
chr10:+:59006329..59007294
Molecular Weight (calculated)
36766.4 Da
IEP (calculated)
10.702
GRAVY (calculated)
-0.907
Length
321 amino acids
Sequence
(BLAST)
001: MGNYRFRLSD MMPNAWFYKL KDMAKSSSRR HSHTTSSSNL QLDKKRQPHN NLGCQRKSYY ISRNLTITSP ISSNSPKLDH NVHITEPSRK SYKKRRSTNF
101: RRRNSPKPVN SSASVESVWT KPDSTPEQYP NSSSSSSSSS PSSILPHKSN PIASISPSCD CRTDYTNQNS ANLDPGVHSV SKIDLPRIIT KPEKFNEKIQ
201: EKQRIVKQEQ RIVRRVSTNG VKLRTNSPRI TTTTTNSRKS VSSKRTSVTT DSFAVVKSSR NPQKDFRESM VEMIIENNIT TSKDLEELLA CYLSLNSDEY
301: HDIIIKVFKQ IWFEITEIRL K
Best Arabidopsis Sequence Match ( AT2G30400.1 )
(BLAST)
001: MGNYKFRISE MLPNAWFHKL KDVTKHSKPK NKASSSSSNT CSKKKPSSDS LPQHSYFSNS LVANNPPHHN SPRNSLHTKK MSKRKTLYKP SLKPLTPPPL
101: LVSASFNKSK INDQDSSYSL FPAIETSPES FVYSFYEEDD DDEFVEFSNF KINTKNKAFT KQKVKVIDSV EKACTASKPI KKPQKSHLSV KISRDEDDNE
201: YKAEKKYQRQ VSSGRKPSAG INLKRVNSPR IQLSGTRRST SRRSESKQDV LESFAVMKRS VDPKKDFRES MIEMIEENNI RASKDLEDLL ACYLTLNPKE
301: YHDLIIHVFE QIWLQLTKTK
Arabidopsis Description
OFP2Transcription repressor OFP2 [Source:UniProtKB/Swiss-Prot;Acc:O04351]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.