Factsheet for Solyc04g080210.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400095058	Potato	plastid	85.71	96.2
Bra024464.1-P	Field mustard	cytosol	15.79	48.28
KRH50362	Soybean	cytosol	19.55	41.6
Solyc11g068780.1.1	Tomato	cytosol	17.29	33.58
KRH51868	Soybean	mitochondrion	30.45	32.14
KRH61189	Soybean	mitochondrion	31.2	32.05
Solyc01g007800.2.1	Tomato	mitochondrion	19.92	29.12
GSMUA_Achr4P14010_001	Banana	nucleus	22.56	27.91
Solyc10g082050.1.1	Tomato	mitochondrion	18.42	27.53
AT2G18500.1	Thale cress	mitochondrion, plastid	31.2	26.35
CDY72229	Canola	nucleus	30.45	25.8
CDY29238	Canola	nucleus, plastid	29.32	25.74
CDY43893	Canola	nucleus	30.45	25.71
Bra039604.1-P	Field mustard	nucleus	30.45	25.71
CDY36485	Canola	nucleus	30.08	25.64
VIT_18s0001g12310.t01	Wine grape	mitochondrion	34.21	24.93
CDY59540	Canola	plastid	25.19	23.18
GSMUA_Achr7P25950_001	Banana	mitochondrion	28.2	22.87
Solyc09g018200.1.1	Tomato	nucleus	21.05	22.31
Solyc03g034100.2.1	Tomato	mitochondrion	31.95	21.74
TraesCS4B01G262000.1	Wheat	mitochondrion	21.43	20.65
TraesCS4D01G262000.1	Wheat	mitochondrion	21.05	20.14
TraesCS4A01G041100.1	Wheat	mitochondrion	21.05	19.93
Zm00001d000458_P001	Maize	mitochondrion, plastid	21.05	19.44
Os03t0197900-01	Rice	mitochondrion, plastid	19.92	19.27
Solyc10g076180.1.1	Tomato	nucleus	21.8	18.07
EER92692	Sorghum	mitochondrion	21.05	17.95
Solyc02g085500.2.1	Tomato	mitochondrion	18.42	17.63
HORVU4Hr1G070860.1	Barley	cytosol, mitochondrion	21.43	16.96
Solyc06g082460.1.1	Tomato	nucleus	21.8	16.52
Solyc02g072030.1.1	Tomato	mitochondrion, nucleus, plastid	18.05	12.73
Solyc08g068170.1.1	Tomato	plastid	23.68	12.5

Protein Annotations

EnsemblPlants:Solyc04g080210.1.1	EnsemblPlantsGene:Solyc04g080210.1	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	ncoils:Coil
PANTHER:PTHR33057	PANTHER:PTHR33057:SF68	PFAM:PF04844	PFscan:PS51754	SEG:seg	TIGRFAMs:TIGR01568
UniParc:UPI0002765666	UniProt:K4BVA0	MapMan:15.5.37	:	:	:

Description

No Description!

Coordinates

chr4:-:64461786..64462586

Molecular Weight (calculated)

30766.7 Da

IEP (calculated)

9.162

GRAVY (calculated)

-0.714

Length

266 amino acids

Sequence
(BLAST)

001: MTRRFKLKLS MPSFRFCRPK KASFLPKSPM PLSLYKFSPA NILDNSPVPV PPSTPHHPYI LRKAHNLASK TYNSPSSEYS DPDNNNMRRG ESRKSRLNMS
101: FSSVDSGWFS FNSECCDEKP NDETESFMSS PSFESSFDVD HGIDPLSGIR RKKNNNNTKV RRLRRYLSNS LKDSMMPCMA DGKVNESFAI VKRSVDPYDD
201: FKNSMKEMIM EKEMFEAEDL EQLLLCFLSL NSRHHHAIIV EAFTEIWEEL FGKSSKSMDL KLPRFQ

Best Arabidopsis Sequence Match ( AT2G18500.1 )
(BLAST)

001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC

Arabidopsis Description

OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.