Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039604.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY72229 | Canola | nucleus | 93.33 | 93.63 |
| CDY59540 | Canola | plastid | 83.17 | 90.66 |
| CDY29238 | Canola | nucleus, plastid | 81.59 | 84.82 |
| CDY36485 | Canola | nucleus | 82.86 | 83.65 |
| AT2G18500.1 | Thale cress | mitochondrion, plastid | 77.14 | 77.14 |
| CDY02814 | Canola | cytosol | 7.3 | 46.0 |
| CDY32706 | Canola | cytosol | 7.3 | 46.0 |
| KRH50362 | Soybean | cytosol | 12.38 | 31.2 |
| PGSC0003DMT400033048 | Potato | mitochondrion, nucleus, plastid | 33.97 | 30.57 |
| Solyc04g080210.1.1 | Tomato | mitochondrion | 25.71 | 30.45 |
| KRH61189 | Soybean | mitochondrion | 24.76 | 30.12 |
| VIT_18s0001g12310.t01 | Wine grape | mitochondrion | 34.6 | 29.86 |
| PGSC0003DMT400045857 | Potato | mitochondrion | 36.83 | 29.22 |
| Solyc03g034100.2.1 | Tomato | mitochondrion | 35.56 | 28.64 |
| CDY44933 | Canola | mitochondrion | 18.73 | 28.64 |
| KRH51868 | Soybean | mitochondrion | 22.86 | 28.57 |
| CDX92512 | Canola | mitochondrion | 19.37 | 28.5 |
| CDY58970 | Canola | mitochondrion | 19.37 | 28.5 |
| GSMUA_Achr4P14010_001 | Banana | nucleus | 19.05 | 27.91 |
| PGSC0003DMT400095058 | Potato | plastid | 20.95 | 27.85 |
| CDY42284 | Canola | mitochondrion | 18.1 | 27.54 |
| Solyc02g085500.2.1 | Tomato | mitochondrion | 22.54 | 25.54 |
| CDX75076 | Canola | nucleus | 14.92 | 25.27 |
| GSMUA_Achr7P25950_001 | Banana | mitochondrion | 25.4 | 24.39 |
| CDY43753 | Canola | nucleus | 14.29 | 24.19 |
| TraesCS4B01G262000.1 | Wheat | mitochondrion | 19.37 | 22.1 |
| TraesCS4A01G041100.1 | Wheat | mitochondrion | 19.37 | 21.71 |
| TraesCS4D01G262000.1 | Wheat | mitochondrion | 19.05 | 21.58 |
| CDY04827 | Canola | nucleus | 17.14 | 21.01 |
| Os03t0197900-01 | Rice | mitochondrion, plastid | 17.78 | 20.36 |
| Zm00001d000458_P001 | Maize | mitochondrion, plastid | 17.78 | 19.44 |
| EER92692 | Sorghum | mitochondrion | 19.05 | 19.23 |
| HORVU4Hr1G070860.1 | Barley | cytosol, mitochondrion | 19.68 | 18.45 |
| CDX84837 | Canola | nucleus | 13.65 | 17.92 |
| CDY32990 | Canola | nucleus | 15.56 | 17.13 |
| CDY43860 | Canola | nucleus | 15.56 | 16.9 |
| CDX97830 | Canola | nucleus | 15.87 | 15.77 |
| CDY29674 | Canola | nucleus | 16.19 | 15.74 |
| CDX99420 | Canola | mitochondrion | 16.19 | 15.6 |
| CDX78899 | Canola | mitochondrion | 15.87 | 15.34 |
| CDY09258 | Canola | mitochondrion | 15.56 | 15.31 |
| CDY10735 | Canola | nucleus | 14.92 | 15.21 |
| CDY62219 | Canola | nucleus | 14.6 | 14.89 |
| CDY02063 | Canola | nucleus | 14.6 | 14.79 |
| CDY01560 | Canola | nucleus | 16.19 | 14.33 |
| CDY06241 | Canola | mitochondrion | 13.65 | 14.29 |
| CDY09945 | Canola | nucleus, plastid | 13.65 | 14.29 |
| CDY67505 | Canola | nucleus, plastid | 13.02 | 13.62 |
| CDY32705 | Canola | mitochondrion | 7.94 | 12.38 |
| CDY62560 | Canola | nucleus | 15.24 | 10.17 |
| CDY02815 | Canola | plastid | 6.35 | 10.1 |
Protein Annotations
| EnsemblPlants:CDY43893 | EnsemblPlantsGene:GSBRNA2T00077456001 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PANTHER:PTHR33057 |
| PANTHER:PTHR33057:SF68 | PFAM:PF04844 | PFscan:PS51754 | ProteinID:CDY43893 | ProteinID:CDY43893.1 | SEG:seg |
| TIGRFAMs:TIGR01568 | UniParc:UPI0002541101 | UniProt:A0A078I443 | MapMan:15.5.37 | : | : |
Description
BnaA07g01700DBnaA07g01700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I443]
Coordinates
chrLK032572:+:20860..21807
Molecular Weight (calculated)
35724.3 Da
IEP (calculated)
10.558
GRAVY (calculated)
-0.769
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKRFKLKIT RILSFKSCRS KDPSDLPFDP VRSFPRPSPP PANPITTVTT VPQRRRSSLR QHVFTTFGCG SSRRRSSALL DVSRRNSPSL SPPQTPTFQW
101: ESEGKWHVIA QVDEGEYETP RRKIYDGDDR RRSVKKYARR RGSISSTEEY EEETGRESLL PSSTNLSPES SSSGLPRVTR RRRNHPRKKN TSLAVEEKSE
201: SPSPPPSPAR LSSFVQRLIP CTAAAPVVME GVAVVKRSED PYEDFKGSMM EMIVEKNMFE VAELEQLLSC FLTLNAKRHH RAIVKAFSEV WVALFSGGNN
301: SSRRSSVRLS DYDEC
101: ESEGKWHVIA QVDEGEYETP RRKIYDGDDR RRSVKKYARR RGSISSTEEY EEETGRESLL PSSTNLSPES SSSGLPRVTR RRRNHPRKKN TSLAVEEKSE
201: SPSPPPSPAR LSSFVQRLIP CTAAAPVVME GVAVVKRSED PYEDFKGSMM EMIVEKNMFE VAELEQLLSC FLTLNAKRHH RAIVKAFSEV WVALFSGGNN
301: SSRRSSVRLS DYDEC
001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
Arabidopsis Description
OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.