Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- nucleus 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY32705 | Canola | mitochondrion | 62.12 | 60.89 |
CDY32706 | Canola | cytosol | 4.55 | 18.0 |
CDY02814 | Canola | cytosol | 4.04 | 16.0 |
CDY32990 | Canola | nucleus | 17.17 | 11.89 |
CDY43860 | Canola | nucleus | 17.17 | 11.72 |
CDX84837 | Canola | nucleus | 13.13 | 10.83 |
CDX92512 | Canola | mitochondrion | 11.62 | 10.75 |
CDY58970 | Canola | mitochondrion | 11.62 | 10.75 |
CDY44933 | Canola | mitochondrion | 11.11 | 10.68 |
CDY42284 | Canola | mitochondrion | 11.11 | 10.63 |
CDY04827 | Canola | nucleus | 12.63 | 9.73 |
CDY10735 | Canola | nucleus | 15.15 | 9.71 |
CDY02063 | Canola | nucleus | 15.15 | 9.65 |
CDY06241 | Canola | mitochondrion | 13.64 | 8.97 |
CDX97830 | Canola | nucleus | 13.64 | 8.52 |
CDY62219 | Canola | nucleus | 13.13 | 8.41 |
CDY29674 | Canola | nucleus | 13.64 | 8.33 |
CDY09945 | Canola | nucleus, plastid | 12.63 | 8.31 |
CDY67505 | Canola | nucleus, plastid | 12.12 | 7.97 |
CDX75076 | Canola | nucleus | 7.07 | 7.53 |
CDY09258 | Canola | mitochondrion | 12.12 | 7.5 |
CDX78899 | Canola | mitochondrion | 11.62 | 7.06 |
CDX99420 | Canola | mitochondrion | 11.62 | 7.03 |
CDY43753 | Canola | nucleus | 6.57 | 6.99 |
CDY72229 | Canola | nucleus | 10.61 | 6.69 |
CDY43893 | Canola | nucleus | 10.1 | 6.35 |
CDY59540 | Canola | plastid | 9.09 | 6.23 |
CDY29238 | Canola | nucleus, plastid | 9.09 | 5.94 |
CDY01560 | Canola | nucleus | 10.61 | 5.9 |
CDY36485 | Canola | nucleus | 9.09 | 5.77 |
CDY62560 | Canola | nucleus | 12.12 | 5.08 |
PGSC0003DMT400037629 | Potato | plastid | 9.6 | 4.5 |
Solyc08g068170.1.1 | Tomato | plastid | 9.6 | 3.77 |
Protein Annotations
EnsemblPlants:CDY02815 | EnsemblPlantsGene:GSBRNA2T00114992001 | GO:A0A078ELC0 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0005488 | InterPro:DNA_bnd_dom_ovate | PFAM:PF13724 | ProteinID:CDY02815 | ProteinID:CDY02815.1 | SEG:seg |
UniParc:UPI0004EDD6BC | MapMan:35.1 | : | : | : | : |
Description
BnaC02g10740D
Coordinates
chrLK031937:-:563022..563767
Molecular Weight (calculated)
22207.6 Da
IEP (calculated)
11.538
GRAVY (calculated)
-0.787
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQKMGTHKF RFSAIMPHSW LYKLKGISRS SRKRLPYTSP PLMLLPQESS VKLFFFLHLF ITLKPSSRLK LSSSSLNSHV TLTTYRNHRS STVGSSSKPV
101: SSSPSDQNYG FSREPESKSV DIKALNRVDS EDPSISDNSS PVLVETVNKK TCDTRTQQKL KKPKAGSSGI RIRANSPKIA RRKTKGRTSY TSKRKGNS
101: SSSPSDQNYG FSREPESKSV DIKALNRVDS EDPSISDNSS PVLVETVNKK TCDTRTQQKL KKPKAGSSGI RIRANSPKIA RRKTKGRTSY TSKRKGNS
001: MKQKMGTHKF RFSDMMPHSW LYKLKGMSRS SRKHHLSSPK HLSSADASSS RKLRDPLRRL SSTAHHPQAS NSPPKSSSFK RKIKRKTVYK PSSRLKLSTS
101: SSLNHRSKSS SSANAISDSA VGSFLDRVSS PSDQNFVHDP EPHSSIDIKD ELSVRKLDDV PEDPSVSPNL SPETAKEPPF EMMTQQKLKK PKAHSSGIKI
201: PTKIVRKKKK ERTSQVSKKK GVVKSFAIVL SSVDPEKDFR ESMVEMIMEN KMREQKDLED LLACYLSLNS SEYHDVIIKA FENTWLHLTQ GLSISL
101: SSLNHRSKSS SSANAISDSA VGSFLDRVSS PSDQNFVHDP EPHSSIDIKD ELSVRKLDDV PEDPSVSPNL SPETAKEPPF EMMTQQKLKK PKAHSSGIKI
201: PTKIVRKKKK ERTSQVSKKK GVVKSFAIVL SSVDPEKDFR ESMVEMIMEN KMREQKDLED LLACYLSLNS SEYHDVIIKA FENTWLHLTQ GLSISL
Arabidopsis Description
OFP3Transcription repressor OFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVL4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.