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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32705 Canola mitochondrion 62.12 60.89
CDY32706 Canola cytosol 4.55 18.0
CDY02814 Canola cytosol 4.04 16.0
CDY32990 Canola nucleus 17.17 11.89
CDY43860 Canola nucleus 17.17 11.72
CDX84837 Canola nucleus 13.13 10.83
CDX92512 Canola mitochondrion 11.62 10.75
CDY58970 Canola mitochondrion 11.62 10.75
CDY44933 Canola mitochondrion 11.11 10.68
CDY42284 Canola mitochondrion 11.11 10.63
CDY04827 Canola nucleus 12.63 9.73
CDY10735 Canola nucleus 15.15 9.71
CDY02063 Canola nucleus 15.15 9.65
CDY06241 Canola mitochondrion 13.64 8.97
CDX97830 Canola nucleus 13.64 8.52
CDY62219 Canola nucleus 13.13 8.41
CDY29674 Canola nucleus 13.64 8.33
CDY09945 Canola nucleus, plastid 12.63 8.31
CDY67505 Canola nucleus, plastid 12.12 7.97
CDX75076 Canola nucleus 7.07 7.53
CDY09258 Canola mitochondrion 12.12 7.5
CDX78899 Canola mitochondrion 11.62 7.06
CDX99420 Canola mitochondrion 11.62 7.03
CDY43753 Canola nucleus 6.57 6.99
CDY72229 Canola nucleus 10.61 6.69
CDY43893 Canola nucleus 10.1 6.35
CDY59540 Canola plastid 9.09 6.23
CDY29238 Canola nucleus, plastid 9.09 5.94
CDY01560 Canola nucleus 10.61 5.9
CDY36485 Canola nucleus 9.09 5.77
CDY62560 Canola nucleus 12.12 5.08
PGSC0003DMT400037629 Potato plastid 9.6 4.5
Solyc08g068170.1.1 Tomato plastid 9.6 3.77
Protein Annotations
EnsemblPlants:CDY02815EnsemblPlantsGene:GSBRNA2T00114992001GO:A0A078ELC0GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:DNA_bnd_dom_ovatePFAM:PF13724ProteinID:CDY02815ProteinID:CDY02815.1SEG:seg
UniParc:UPI0004EDD6BCMapMan:35.1::::
Description
BnaC02g10740D
Coordinates
chrLK031937:-:563022..563767
Molecular Weight (calculated)
22207.6 Da
IEP (calculated)
11.538
GRAVY (calculated)
-0.787
Length
198 amino acids
Sequence
(BLAST)
001: MNQKMGTHKF RFSAIMPHSW LYKLKGISRS SRKRLPYTSP PLMLLPQESS VKLFFFLHLF ITLKPSSRLK LSSSSLNSHV TLTTYRNHRS STVGSSSKPV
101: SSSPSDQNYG FSREPESKSV DIKALNRVDS EDPSISDNSS PVLVETVNKK TCDTRTQQKL KKPKAGSSGI RIRANSPKIA RRKTKGRTSY TSKRKGNS
Best Arabidopsis Sequence Match ( AT5G58360.1 )
(BLAST)
001: MKQKMGTHKF RFSDMMPHSW LYKLKGMSRS SRKHHLSSPK HLSSADASSS RKLRDPLRRL SSTAHHPQAS NSPPKSSSFK RKIKRKTVYK PSSRLKLSTS
101: SSLNHRSKSS SSANAISDSA VGSFLDRVSS PSDQNFVHDP EPHSSIDIKD ELSVRKLDDV PEDPSVSPNL SPETAKEPPF EMMTQQKLKK PKAHSSGIKI
201: PTKIVRKKKK ERTSQVSKKK GVVKSFAIVL SSVDPEKDFR ESMVEMIMEN KMREQKDLED LLACYLSLNS SEYHDVIIKA FENTWLHLTQ GLSISL
Arabidopsis Description
OFP3Transcription repressor OFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVL4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.