Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024464.1-P | Field mustard | cytosol | 28.71 | 100.0 |
| CDY36485 | Canola | nucleus | 94.72 | 91.99 |
| CDY43893 | Canola | nucleus | 84.82 | 81.59 |
| CDY72229 | Canola | nucleus | 83.17 | 80.25 |
| CDY59540 | Canola | plastid | 74.59 | 78.2 |
| AT2G18500.1 | Thale cress | mitochondrion, plastid | 76.24 | 73.33 |
| CDY32706 | Canola | cytosol | 7.26 | 44.0 |
| CDY02814 | Canola | cytosol | 7.26 | 44.0 |
| KRH50362 | Soybean | cytosol | 13.53 | 32.8 |
| PGSC0003DMT400033048 | Potato | mitochondrion, nucleus, plastid | 35.31 | 30.57 |
| KRH61189 | Soybean | mitochondrion | 25.41 | 29.73 |
| KRH51868 | Soybean | mitochondrion | 24.42 | 29.37 |
| Solyc04g080210.1.1 | Tomato | mitochondrion | 25.74 | 29.32 |
| VIT_18s0001g12310.t01 | Wine grape | mitochondrion | 34.98 | 29.04 |
| PGSC0003DMT400045857 | Potato | mitochondrion | 37.95 | 28.97 |
| Solyc03g034100.2.1 | Tomato | mitochondrion | 36.63 | 28.39 |
| GSMUA_Achr4P14010_001 | Banana | nucleus | 19.8 | 27.91 |
| CDY44933 | Canola | mitochondrion | 18.81 | 27.67 |
| CDY58970 | Canola | mitochondrion | 19.47 | 27.57 |
| CDX92512 | Canola | mitochondrion | 19.47 | 27.57 |
| PGSC0003DMT400095058 | Potato | plastid | 21.45 | 27.43 |
| CDY42284 | Canola | mitochondrion | 18.15 | 26.57 |
| CDX75076 | Canola | nucleus | 15.84 | 25.81 |
| CDY43753 | Canola | nucleus | 15.51 | 25.27 |
| Solyc02g085500.2.1 | Tomato | mitochondrion | 23.1 | 25.18 |
| GSMUA_Achr7P25950_001 | Banana | mitochondrion | 26.07 | 24.09 |
| TraesCS4B01G262000.1 | Wheat | mitochondrion | 19.14 | 21.01 |
| TraesCS4A01G041100.1 | Wheat | mitochondrion | 19.47 | 21.0 |
| Os03t0197900-01 | Rice | mitochondrion, plastid | 18.81 | 20.73 |
| TraesCS4D01G262000.1 | Wheat | mitochondrion | 18.81 | 20.5 |
| CDY04827 | Canola | nucleus | 17.16 | 20.23 |
| Zm00001d000458_P001 | Maize | mitochondrion, plastid | 18.48 | 19.44 |
| EER92692 | Sorghum | mitochondrion | 19.8 | 19.23 |
| HORVU4Hr1G070860.1 | Barley | cytosol, mitochondrion | 19.47 | 17.56 |
| CDX84837 | Canola | nucleus | 13.86 | 17.5 |
| CDY32990 | Canola | nucleus | 16.5 | 17.48 |
| CDY43860 | Canola | nucleus | 16.5 | 17.24 |
| CDX78899 | Canola | mitochondrion | 17.16 | 15.95 |
| CDY09258 | Canola | mitochondrion | 16.83 | 15.94 |
| CDX99420 | Canola | mitochondrion | 17.16 | 15.9 |
| CDX97830 | Canola | nucleus | 16.5 | 15.77 |
| CDY29674 | Canola | nucleus | 16.83 | 15.74 |
| CDY10735 | Canola | nucleus | 15.51 | 15.21 |
| CDY62219 | Canola | nucleus | 15.18 | 14.89 |
| CDY02063 | Canola | nucleus | 15.18 | 14.79 |
| CDY01560 | Canola | nucleus | 17.16 | 14.61 |
| CDY06241 | Canola | mitochondrion | 13.53 | 13.62 |
| CDY09945 | Canola | nucleus, plastid | 13.53 | 13.62 |
| CDY67505 | Canola | nucleus, plastid | 12.87 | 12.96 |
| CDY32705 | Canola | mitochondrion | 7.92 | 11.88 |
| CDY62560 | Canola | nucleus | 16.5 | 10.59 |
| CDY02815 | Canola | plastid | 5.94 | 9.09 |
Protein Annotations
| EnsemblPlants:CDY29238 | EnsemblPlantsGene:GSBRNA2T00042166001 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PANTHER:PTHR33057 |
| PANTHER:PTHR33057:SF68 | PFAM:PF04844 | PFscan:PS51754 | ProteinID:CDY29238 | ProteinID:CDY29238.1 | SEG:seg |
| TIGRFAMs:TIGR01568 | UniParc:UPI0004EE9411 | UniProt:A0A078GX99 | MapMan:15.5.37 | : | : |
Description
BnaA06g25190DBnaA06g25190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GX99]
Coordinates
chrLK032233:+:436317..437228
Molecular Weight (calculated)
34083.2 Da
IEP (calculated)
10.687
GRAVY (calculated)
-0.797
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRFKVKISR ILSFKSCRSK DSSDLPFNPV PSLPRRPPPS ADPSTTVTTV PHRRRSSFRQ HVLTTFGCGS SRRRSSTPLD ISRRNSTSVS PPQTPTFQWE
101: SEGKWHVIVQ EDEGEPRPKI YDGDDRRRRS VKKERHARRR GSTSSADEET ERESLLPSST NLSPESSSSG LPRVTRLRRN PPTRKSESSS SPPLSPARLS
201: SFVQRLIPCT AASAVAMEGV AVVKRSEDPY EDFKGSMMEM IVEKNMSEMA ELEQLLSCFL TLNAKRHHRA IVRAFSEVWV ALFSGGNDGS RRSSVQLSDY
301: DEC
101: SEGKWHVIVQ EDEGEPRPKI YDGDDRRRRS VKKERHARRR GSTSSADEET ERESLLPSST NLSPESSSSG LPRVTRLRRN PPTRKSESSS SPPLSPARLS
201: SFVQRLIPCT AASAVAMEGV AVVKRSEDPY EDFKGSMMEM IVEKNMSEMA ELEQLLSCFL TLNAKRHHRA IVRAFSEVWV ALFSGGNDGS RRSSVQLSDY
301: DEC
001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
Arabidopsis Description
OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.