Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039604.1-P | Field mustard | nucleus | 93.63 | 93.33 |
| CDY43893 | Canola | nucleus | 93.63 | 93.33 |
| CDY59540 | Canola | plastid | 81.85 | 88.93 |
| CDY36485 | Canola | nucleus | 82.8 | 83.33 |
| CDY29238 | Canola | nucleus, plastid | 80.25 | 83.17 |
| AT2G18500.1 | Thale cress | mitochondrion, plastid | 74.52 | 74.29 |
| CDY32706 | Canola | cytosol | 7.01 | 44.0 |
| CDY02814 | Canola | cytosol | 7.01 | 44.0 |
| KRH50362 | Soybean | cytosol | 12.42 | 31.2 |
| PGSC0003DMT400033048 | Potato | mitochondrion, nucleus, plastid | 34.71 | 31.14 |
| Solyc04g080210.1.1 | Tomato | mitochondrion | 25.8 | 30.45 |
| KRH61189 | Soybean | mitochondrion | 24.84 | 30.12 |
| GSMUA_Achr4P14010_001 | Banana | nucleus | 20.38 | 29.77 |
| VIT_18s0001g12310.t01 | Wine grape | mitochondrion | 34.08 | 29.32 |
| CDY44933 | Canola | mitochondrion | 19.11 | 29.13 |
| PGSC0003DMT400045857 | Potato | mitochondrion | 36.62 | 28.97 |
| KRH51868 | Soybean | mitochondrion | 22.93 | 28.57 |
| CDX92512 | Canola | mitochondrion | 19.43 | 28.5 |
| CDY58970 | Canola | mitochondrion | 19.43 | 28.5 |
| Solyc03g034100.2.1 | Tomato | mitochondrion | 35.03 | 28.13 |
| CDY42284 | Canola | mitochondrion | 18.47 | 28.02 |
| PGSC0003DMT400095058 | Potato | plastid | 21.02 | 27.85 |
| Solyc02g085500.2.1 | Tomato | mitochondrion | 23.25 | 26.26 |
| GSMUA_Achr7P25950_001 | Banana | mitochondrion | 27.39 | 26.22 |
| CDX75076 | Canola | nucleus | 14.97 | 25.27 |
| TraesCS4B01G262000.1 | Wheat | mitochondrion | 21.02 | 23.91 |
| CDY43753 | Canola | nucleus | 14.01 | 23.66 |
| TraesCS4A01G041100.1 | Wheat | mitochondrion | 21.02 | 23.49 |
| TraesCS4D01G262000.1 | Wheat | mitochondrion | 20.7 | 23.38 |
| Os03t0197900-01 | Rice | mitochondrion, plastid | 19.11 | 21.82 |
| CDY04827 | Canola | nucleus | 16.56 | 20.23 |
| Zm00001d000458_P001 | Maize | mitochondrion, plastid | 18.47 | 20.14 |
| HORVU4Hr1G070860.1 | Barley | cytosol, mitochondrion | 21.34 | 19.94 |
| EER92692 | Sorghum | mitochondrion | 19.75 | 19.87 |
| CDX84837 | Canola | nucleus | 13.38 | 17.5 |
| CDY32990 | Canola | nucleus | 15.29 | 16.78 |
| CDY43860 | Canola | nucleus | 15.29 | 16.55 |
| CDX99420 | Canola | mitochondrion | 16.56 | 15.9 |
| CDX78899 | Canola | mitochondrion | 16.24 | 15.64 |
| CDY09258 | Canola | mitochondrion | 15.92 | 15.62 |
| CDX97830 | Canola | nucleus | 15.61 | 15.46 |
| CDY29674 | Canola | nucleus | 15.92 | 15.43 |
| CDY10735 | Canola | nucleus | 14.65 | 14.89 |
| CDY01560 | Canola | nucleus | 16.56 | 14.61 |
| CDY62219 | Canola | nucleus | 14.33 | 14.56 |
| CDY02063 | Canola | nucleus | 14.33 | 14.47 |
| CDY09945 | Canola | nucleus, plastid | 13.38 | 13.95 |
| CDY06241 | Canola | mitochondrion | 13.38 | 13.95 |
| CDY67505 | Canola | nucleus, plastid | 12.74 | 13.29 |
| CDY32705 | Canola | mitochondrion | 8.28 | 12.87 |
| CDY02815 | Canola | plastid | 6.69 | 10.61 |
| CDY62560 | Canola | nucleus | 15.61 | 10.38 |
Protein Annotations
| EnsemblPlants:CDY72229 | EnsemblPlantsGene:GSBRNA2T00025823001 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PANTHER:PTHR33057 |
| PANTHER:PTHR33057:SF68 | PFAM:PF04844 | PFscan:PS51754 | ProteinID:CDY72229 | ProteinID:CDY72229.1 | SEG:seg |
| TIGRFAMs:TIGR01568 | UniParc:UPI0004EC1FF4 | UniProt:A0A078JZV9 | MapMan:15.5.37 | : | : |
Description
BnaCnng76610DBnaCnng76610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JZV9]
Coordinates
chrLK049663:-:668..1612
Molecular Weight (calculated)
35774.4 Da
IEP (calculated)
10.665
GRAVY (calculated)
-0.795
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKRFKLKIT RILSFKSCRS KVPSDLPFDP VRSFPRPSPP PANPITTVPQ RRRSTLRQHV FTTFGCGSSR RRSSAPLAVS RRNSPSLSPP QTPTFQWERE
101: GIWHVVTQED GGEYETPRRK IYDGDDRRRL VKKERYARRR GSTSSAEEYE EETERETLLP SSTNLSPESS SSGLPRVTRR RRNHPRKKNT SLVVEEKSES
201: PSPPPSPARL SSFVQRLIPC TAASPVVMEG VAVVKRSEDP YEDFKGSMME MVVEKNMFEV AELEQLLSCF LTLNAKRHHR AIVKAFSEVW VALFSGGNNS
301: SRRSSVRLSD YDEC
101: GIWHVVTQED GGEYETPRRK IYDGDDRRRL VKKERYARRR GSTSSAEEYE EETERETLLP SSTNLSPESS SSGLPRVTRR RRNHPRKKNT SLVVEEKSES
201: PSPPPSPARL SSFVQRLIPC TAASPVVMEG VAVVKRSEDP YEDFKGSMME MVVEKNMFEV AELEQLLSCF LTLNAKRHHR AIVKAFSEVW VALFSGGNNS
301: SRRSSVRLSD YDEC
001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC
Arabidopsis Description
OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.