Factsheet for PGSC0003DMT400033048

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:

nucleus 5
plastid 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g085500.2.1	Tomato	mitochondrion	73.14	92.09
Bra024464.1-P	Field mustard	cytosol	12.57	50.57
KRH50362	Soybean	cytosol	14.86	41.6
VIT_18s0001g12310.t01	Wine grape	mitochondrion	37.71	36.16
PGSC0003DMT400045857	Potato	mitochondrion	40.86	36.02
CDY29238	Canola	nucleus, plastid	30.57	35.31
AT2G18500.1	Thale cress	mitochondrion, plastid	31.43	34.92
CDY72229	Canola	nucleus	31.14	34.71
CDY36485	Canola	nucleus	30.57	34.29
KRH51868	Soybean	mitochondrion	24.57	34.13
CDY43893	Canola	nucleus	30.57	33.97
Bra039604.1-P	Field mustard	nucleus	30.57	33.97
KRH61189	Soybean	mitochondrion	24.86	33.59
GSMUA_Achr4P14010_001	Banana	nucleus	20.29	33.02
CDY59540	Canola	plastid	26.86	32.53
PGSC0003DMT400095058	Potato	plastid	21.14	31.22
PGSC0003DMT400000838	Potato	nucleus	22.29	27.86
PGSC0003DMT400042334	Potato	mitochondrion	14.29	27.17
GSMUA_Achr7P25950_001	Banana	mitochondrion	25.43	27.13
PGSC0003DMT400050511	Potato	cytosol	10.57	26.62
PGSC0003DMT400072347	Potato	mitochondrion, plastid	13.71	25.4
Os03t0197900-01	Rice	mitochondrion, plastid	18.0	22.91
TraesCS4B01G262000.1	Wheat	mitochondrion	17.43	22.1
TraesCS4A01G041100.1	Wheat	mitochondrion	17.43	21.71
TraesCS4D01G262000.1	Wheat	mitochondrion	17.14	21.58
Zm00001d000458_P001	Maize	mitochondrion, plastid	15.71	19.1
PGSC0003DMT400011286	Potato	nucleus	14.86	18.31
EER92692	Sorghum	mitochondrion	16.29	18.27
HORVU4Hr1G070860.1	Barley	cytosol, mitochondrion	17.14	17.86
PGSC0003DMT400078126	Potato	nucleus	17.71	17.66
PGSC0003DMT400037629	Potato	plastid	19.14	15.88
PGSC0003DMT400073252	Potato	nucleus	13.14	11.22

Protein Annotations

EnsemblPlants:PGSC0003DMT400033048	EnsemblPlantsGene:PGSC0003DMG400012688	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PANTHER:PTHR33057
PANTHER:PTHR33057:SF68	PFAM:PF04844	PFscan:PS51754	PGSC:PGSC0003DMG400012688	SEG:seg	TIGRFAMs:TIGR01568
UniParc:UPI000295EF4A	UniProt:M1AYJ0	MapMan:15.5.37	:	:	:

Description

Ovate protein [Source:PGSC_GENE;Acc:PGSC0003DMG400012688]

Coordinates

chr2:+:40752283..40754017

Molecular Weight (calculated)

40460.8 Da

IEP (calculated)

9.531

GRAVY (calculated)

-0.818

Length

350 amino acids

Sequence
(BLAST)

001: MGKSFKLRFS RVIASFNSCR SKDTSSLPQN PNFFPHKLTS TKHISPDFPL IDQNHRNYVP ESMMISVGCR SEFKWEKEEK FHVVSSSFVS EEEEEEEINL
101: ALRPPLTPPR FSRIVVEKKK KQQVKKTKKK SRIIRMSTSS ADEYSGILSG TTDWDNNEEE TETLVSSSRS CFDFSSDDSS TDFNPQLETI CETTTMRRRH
201: KRNATTKRRL KHSRPSFSSS KGRRSSVSTS SDSELPARLS VFKKLIPCSV DGKVKESFAI VKKSQDPYED FKRSMMEMIL ENEMFEKNEL EQLLQCFLSL
301: NGKHYHGVIV EAFSDIWETL YLGNNDNDRV RRMSIHDPHP PTVGRRRTSL

Best Arabidopsis Sequence Match ( AT2G18500.1 )
(BLAST)

001: MTKRFKLKIS RILSFKSCRL KDPSSLPFNP VSSSLRRTSP LVNSSADVTT VPQRRRSSFR LHVLTVFGCG RSSTPLDVDL RNSPVLSPPQ TPTFQWESEG
101: KWHVIAQVTE EEYETPRRKI YNGGSEKDNR RRLKKKEKSN SRRRGSISSA EEETDRESLL PSSTNLSPEY SSSELPRVTR RPRQLLKKAV IEEESESSSP
201: PPSPARLSSF VQRLMPCTMA AAVMVEGVAV VKKSEDPYED FKGSMMEMIV EKKMFEVAEL EQLLSCFLSL NAKRHHRAIV RAFSEIWVAL FSGGSGGGRR
301: SSSFSSVRLS DYDEC

Arabidopsis Description

OFP7Transcription repressor OFP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU65]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.