Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g072030.1.1 | Tomato | mitochondrion, nucleus, plastid | 86.83 | 94.43 |
| VIT_10s0003g01750.t01 | Wine grape | nucleus | 16.1 | 33.85 |
| PGSC0003DMT400050511 | Potato | cytosol | 9.02 | 26.62 |
| CDY09258 | Canola | mitochondrion | 20.73 | 26.56 |
| Bra020989.1-P | Field mustard | mitochondrion | 20.73 | 26.48 |
| CDX99420 | Canola | mitochondrion | 20.24 | 25.38 |
| Bra013354.1-P | Field mustard | mitochondrion | 19.76 | 24.85 |
| CDX78899 | Canola | mitochondrion | 19.76 | 24.85 |
| AT4G18830.1 | Thale cress | mitochondrion, nucleus, plastid | 20.98 | 24.64 |
| CDY01560 | Canola | nucleus | 20.98 | 24.16 |
| PGSC0003DMT400011286 | Potato | nucleus | 16.1 | 23.24 |
| Bra012575.1-P | Field mustard | nucleus | 20.73 | 22.97 |
| GSMUA_Achr6P31770_001 | Banana | nucleus | 15.85 | 22.18 |
| GSMUA_Achr9P05640_001 | Banana | nucleus | 15.37 | 21.8 |
| PGSC0003DMT400042334 | Potato | mitochondrion | 9.76 | 21.74 |
| PGSC0003DMT400072347 | Potato | mitochondrion, plastid | 9.76 | 21.16 |
| KRH11062 | Soybean | plastid | 19.02 | 21.08 |
| KRH59028 | Soybean | plastid | 20.98 | 21.03 |
| KRH42918 | Soybean | plastid | 20.98 | 20.82 |
| HORVU3Hr1G071640.1 | Barley | nucleus | 14.39 | 20.42 |
| TraesCS3B01G324100.1 | Wheat | nucleus | 14.39 | 20.27 |
| TraesCS3D01G289200.1 | Wheat | nucleus | 14.39 | 19.93 |
| TraesCS3A01G289400.1 | Wheat | nucleus | 14.15 | 19.59 |
| PGSC0003DMT400078126 | Potato | nucleus | 16.59 | 19.37 |
| KRH21207 | Soybean | plastid | 19.51 | 19.32 |
| PGSC0003DMT400095058 | Potato | plastid | 10.73 | 18.57 |
| Os05t0517100-00 | Rice | mitochondrion | 14.15 | 18.35 |
| PGSC0003DMT400000838 | Potato | nucleus | 12.44 | 18.21 |
| Zm00001d038714_P001 | Maize | nucleus | 13.9 | 18.1 |
| HORVU1Hr1G076490.1 | Barley | nucleus | 15.12 | 17.46 |
| Zm00001d043470_P001 | Maize | mitochondrion, nucleus | 14.39 | 17.46 |
| TraesCS1B01G350500.1 | Wheat | cytosol, mitochondrion, nucleus | 14.39 | 17.1 |
| TraesCS1D01G340300.1 | Wheat | nucleus | 14.39 | 17.1 |
| EES19813 | Sorghum | nucleus | 13.9 | 17.01 |
| EES01480 | Sorghum | nucleus | 14.63 | 16.95 |
| TraesCS1A01G338100.1 | Wheat | cytosol | 13.9 | 16.62 |
| CDY62560 | Canola | nucleus | 18.78 | 16.31 |
| PGSC0003DMT400033048 | Potato | mitochondrion, nucleus, plastid | 11.22 | 13.14 |
| PGSC0003DMT400037629 | Potato | plastid | 12.68 | 12.32 |
| PGSC0003DMT400045857 | Potato | mitochondrion | 11.71 | 12.09 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400073252 | EnsemblPlantsGene:PGSC0003DMG400028460 | EntrezGene:102580543 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C |
| PANTHER:PTHR33057 | PANTHER:PTHR33057:SF10 | PFAM:PF04844 | PFscan:PS51754 | PGSC:PGSC0003DMG400028460 | RefSeq:XP_015169266.1 |
| SEG:seg | TIGRFAMs:TIGR01568 | UniParc:UPI000296AB37 | UniProt:M1CRN9 | MapMan:15.5.37 | : |
Description
ATOFP5/OFP5 [Source:PGSC_GENE;Acc:PGSC0003DMG400028460]
Coordinates
chr2:-:31424122..31425454
Molecular Weight (calculated)
48177.9 Da
IEP (calculated)
8.034
GRAVY (calculated)
-1.034
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MKWGKKKPSS SLITHVFPVS WLSKFKQKKD GRSEDQEGAK MKHKGKVDLT SYTSRTNVCL KEGRFYDDDP YWRISFSEDR FEAHPQNPLW CGSYDECDQD
101: SASNSKSSLG EENHKFNDMV SRKISEKPKK MWNSKNEAEF SNRKRNSVKD EKLRKLSRKA LEERIAENAR EEIAAEVIEK DIFEIEPENE KVMKRGKEKP
201: TAYNSRKTRS LSYTDSSLNS MEESYMTFKS LNLEEEADAL SEEEFESECL EMKDMKIKEM SEKSGCQQRK SVYINQKRRR KHGIKVRAYS PRTAKMECRI
301: KALEDMKKAR MKTRHETKES FRGDRTVFDS YAIMKSSFDP FSDFRDSMIE MITQRGIKSS EELEELLACY LTLNCDEYHD IIIKVFRQVW FELNQVNIGA
401: ELEKCCCSDE
101: SASNSKSSLG EENHKFNDMV SRKISEKPKK MWNSKNEAEF SNRKRNSVKD EKLRKLSRKA LEERIAENAR EEIAAEVIEK DIFEIEPENE KVMKRGKEKP
201: TAYNSRKTRS LSYTDSSLNS MEESYMTFKS LNLEEEADAL SEEEFESECL EMKDMKIKEM SEKSGCQQRK SVYINQKRRR KHGIKVRAYS PRTAKMECRI
301: KALEDMKKAR MKTRHETKES FRGDRTVFDS YAIMKSSFDP FSDFRDSMIE MITQRGIKSS EELEELLACY LTLNCDEYHD IIIKVFRQVW FELNQVNIGA
401: ELEKCCCSDE
001: MRNYKLRLSV MSPSEWFHKL KNMTKPRKKH SLPLYSINTT KKRKPSSESK SLPYSSTSYF FNRSRSRTSF ESRILQISPR NSLHNIQSKR KTVYKPSPPS
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK
Arabidopsis Description
OFP4Transcription repressor OFP4 [Source:UniProtKB/Swiss-Prot;Acc:F4HNU8]
SUBAcon: [mitochondrion,plastid,nucleus]
SUBAcon: [mitochondrion,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.