Factsheet for Bra013354.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78899	Canola	mitochondrion	100.0	100.0
AT4G18830.1	Thale cress	mitochondrion, nucleus, plastid	84.97	79.37
Bra020989.1-P	Field mustard	mitochondrion	71.17	72.27
Bra012575.1-P	Field mustard	nucleus	72.39	63.78
Bra024464.1-P	Field mustard	cytosol	8.59	32.18
VIT_10s0003g01750.t01	Wine grape	nucleus	18.4	30.77
HORVU3Hr1G071640.1	Barley	nucleus	21.17	23.88
TraesCS3B01G324100.1	Wheat	nucleus	21.17	23.71
TraesCS3D01G289200.1	Wheat	nucleus	21.47	23.65
TraesCS3A01G289400.1	Wheat	nucleus	21.47	23.65
GSMUA_Achr9P05640_001	Banana	nucleus	20.25	22.84
Bra040948.1-P	Field mustard	nucleus	18.4	22.81
Solyc02g072030.1.1	Tomato	mitochondrion, nucleus, plastid	24.54	21.22
GSMUA_Achr6P31770_001	Banana	nucleus	19.02	21.16
Bra017266.1-P	Field mustard	nucleus	11.96	20.97
Bra005303.1-P	Field mustard	mitochondrion, plastid	11.96	20.97
Bra018316.1-P	Field mustard	nucleus	19.94	20.57
Bra020055.1-P	Field mustard	mitochondrion	12.58	19.9
PGSC0003DMT400073252	Potato	nucleus	24.85	19.76
Bra002252.1-P	Field mustard	mitochondrion	12.88	19.72
Bra022796.1-P	Field mustard	nucleus	18.4	19.48
Zm00001d038714_P001	Maize	nucleus	18.71	19.37
Bra031546.1-P	Field mustard	mitochondrion, nucleus, plastid	17.79	19.27
HORVU1Hr1G076490.1	Barley	nucleus	20.86	19.15
Os05t0517100-00	Rice	mitochondrion	18.4	18.99
TraesCS1D01G340300.1	Wheat	nucleus	19.94	18.84
TraesCS1B01G350500.1	Wheat	cytosol, mitochondrion, nucleus	19.94	18.84
Bra021632.1-P	Field mustard	nucleus	18.71	18.83
KRH11062	Soybean	plastid	21.17	18.65
TraesCS1A01G338100.1	Wheat	cytosol	19.33	18.37
Zm00001d043470_P001	Maize	mitochondrion, nucleus	19.02	18.34
KRH42918	Soybean	plastid	23.01	18.16
EES01480	Sorghum	nucleus	19.63	18.08
EES19813	Sorghum	nucleus	18.1	17.61
KRH59028	Soybean	plastid	22.09	17.6
Bra002657.1-P	Field mustard	nucleus	18.4	17.54
KRH21207	Soybean	plastid	21.78	17.15
Bra039604.1-P	Field mustard	nucleus	15.34	15.87

Protein Annotations

EnsemblPlants:Bra013354.1	EnsemblPlants:Bra013354.1-P	EnsemblPlantsGene:Bra013354	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C
ncoils:Coil	PANTHER:PTHR33057	PANTHER:PTHR33057:SF10	PFAM:PF04844	PFscan:PS51754	SEG:seg
TIGRFAMs:TIGR01568	UniParc:UPI0002546278	UniProt:M4DA44	MapMan:15.5.37	:	:

Description

AT4G18830 (E=4e-130) ATOFP5, OFP5 | OFP5 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 5)

Coordinates

chrA01:+:5160496..5161476

Molecular Weight (calculated)

37934.2 Da

IEP (calculated)

10.198

GRAVY (calculated)

-1.091

Length

326 amino acids

Sequence
(BLAST)

001: MMRWGRKRPV SSSSSYGLSR AHPVSWFSKL SGSSDLKPAK EKKQDDEKSS KTLQRVSVEK ENAATRSANM ESTDKFEEIM SSVRKKVRDC QRETCGFLKV
101: EAMDRDKGTV RIQVNREKQR CERRDQRLLE QKPKRSEQDA EIKAKNPARR IGTGSYSRND SVILGHTESK PAHQWQKPKD IKLRETKLKA DQQRKSLYLR
201: RELNRLGTKE SNKVRVFSPR ASEKCRVKAI EDLKKAKLRA REQEHELVKE EADGGMENES FALVKCSSDP QRDFRDSMIE MIMENGINHP EDLKGLLVCY
301: LRLNSDEYHD MIINVFQQVH HDLNFH

Best Arabidopsis Sequence Match ( AT4G18830.1 )
(BLAST)

001: MMRWGRKKPV SSSSSSGLSR ALPVSWFSKL SGSSDLKPAK EKKQDEKASQ NISVKTSLSS TTRRSDIHEN SKRFQRVSVE KENSATRSAD KESNEKFEEI
101: MSSVRKKVRD FQKETCGFLE VEAMDRDNGT VILTPRIQVN RDKQRCERRD QRLLEQKPKR SEQDAGVKVK KPARRTGTGG YSREDSVILG HTITKPAHQW
201: EKLKEVKLRE VKLKADQQRK SLYLKRELNR IGTKENNKVR VFSPRASEKC RVKAIEDLKK AKQRAREHEL LIETADGGME NESFAVVKCS SDPQKDFRDS
301: MIEMIMENGI NHPEELKELL VCYLRLNTDE YHDMIISVFQ QVHNDFNFH

Arabidopsis Description

OFP5Transcription repressor OFP5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZN1]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.