Factsheet for Bra022796.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000638.1-P
Bra006085.1-P
Bra009826.1-P
Bra011317.1-P
Bra023965.1-P
Bra027006.1-P
Bra036636.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30400.1	Bra027006.1-P	AT1G62990.1	15781858
AT2G30400.1	Bra036636.1-P	AT1G62990.1	15781858
AT2G30400.1	Bra000638.1-P	AT4G08150.1	15781858
AT2G30400.1	Bra011317.1-P	AT4G32040.1	15781858
AT2G30400.1	Bra023965.1-P	AT4G32040.1	15781858
AT2G30400.1	Bra006085.1-P	AT5G11060.1	15781858
AT2G30400.1	Bra009826.1-P	AT5G25220.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84837	Canola	nucleus	74.68	95.83
CDY62219	Canola	nucleus	95.45	95.15
Bra018316.1-P	Field mustard	nucleus	74.35	72.47
AT2G30400.1	Thale cress	nucleus	73.7	70.94
Bra021632.1-P	Field mustard	nucleus	71.1	67.59
Bra031546.1-P	Field mustard	mitochondrion, nucleus, plastid	51.3	52.49
Bra024464.1-P	Field mustard	cytosol	10.06	35.63
Bra040948.1-P	Field mustard	nucleus	28.57	33.46
Bra002657.1-P	Field mustard	nucleus	30.19	27.19
GSMUA_Achr3P09850_001	Banana	mitochondrion	25.65	24.92
Bra005303.1-P	Field mustard	mitochondrion, plastid	13.64	22.58
Bra017266.1-P	Field mustard	nucleus	13.64	22.58
Bra020055.1-P	Field mustard	mitochondrion	14.61	21.84
Bra002252.1-P	Field mustard	mitochondrion	14.61	21.13
Bra020989.1-P	Field mustard	mitochondrion	21.43	20.56
Bra013354.1-P	Field mustard	mitochondrion	19.48	18.4
Bra012575.1-P	Field mustard	nucleus	20.45	17.03
Bra039604.1-P	Field mustard	nucleus	14.94	14.6

Protein Annotations

MapMan:15.5.37	EnsemblPlantsGene:Bra022796	EnsemblPlants:Bra022796.1	EnsemblPlants:Bra022796.1-P	InterPro:DNA_bnd_dom_ovate	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	UniProt:M4E1Z6	InterPro:Ovate
InterPro:Ovate_C	PFAM:PF04844	PFAM:PF13724	PFscan:PS51754	PANTHER:PTHR33057	PANTHER:PTHR33057:SF22
TIGRFAMs:TIGR01568	UniParc:UPI0002540238	SEG:seg	:	:	:

Description

AT2G30400 (E=4e-072) ATOFP2, OFP2 | OFP2 (OVATE FAMILY PROTEIN 2)

Coordinates

chrA03:+:7097818..7098744

Molecular Weight (calculated)

35433.1 Da

IEP (calculated)

10.539

GRAVY (calculated)

-0.932

Length

308 amino acids

Sequence
(BLAST)

001: MGNYKFKISD MIPNAWLHKL KDMTKQSKPK HKPSSCSSNT CNKKKPSSDS PLLHHSSTFR FSNSLVPNNP HRNSPRNSLY TKRKSKRKTL YKSSLKPVTP
101: FASESSTQSL FPALESSAEY FLFSFYGKED GESVDPSNFK IDRKDKAFTK YKVKESHSTE KTCPASNLIK KPIRGHLSVK INKEKEYDEC RAEKRYQNQV
201: SSGRKSSSGI NLRRVTSPRI QLSGTRTSTS RSKSKQVVLE SFAVVKRSVD PKKDFRESMV EMIDENNIRA SKDLEDLLAC YLSLNPKEYH DLIIHVFEQI
301: WRQFTKTK

Best Arabidopsis Sequence Match ( AT2G30400.1 )
(BLAST)

001: MGNYKFRISE MLPNAWFHKL KDVTKHSKPK NKASSSSSNT CSKKKPSSDS LPQHSYFSNS LVANNPPHHN SPRNSLHTKK MSKRKTLYKP SLKPLTPPPL
101: LVSASFNKSK INDQDSSYSL FPAIETSPES FVYSFYEEDD DDEFVEFSNF KINTKNKAFT KQKVKVIDSV EKACTASKPI KKPQKSHLSV KISRDEDDNE
201: YKAEKKYQRQ VSSGRKPSAG INLKRVNSPR IQLSGTRRST SRRSESKQDV LESFAVMKRS VDPKKDFRES MIEMIEENNI RASKDLEDLL ACYLTLNPKE
301: YHDLIIHVFE QIWLQLTKTK

Arabidopsis Description

OFP2Transcription repressor OFP2 [Source:UniProtKB/Swiss-Prot;Acc:O04351]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.