Factsheet for Bra031546.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:

plastid 3
mitochondrion 4
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000638.1-P
Bra006085.1-P
Bra009826.1-P
Bra011317.1-P
Bra023965.1-P
Bra025497.1-P
Bra027006.1-P
Bra036636.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G06920.1	Bra027006.1-P	AT1G62990.1	15781858
AT1G06920.1	Bra036636.1-P	AT1G62990.1	15781858
AT1G06920.1	Bra000638.1-P	AT4G08150.1	15781858
AT1G06920.1	Bra011317.1-P	AT4G32040.1	15781858
AT1G06920.1	Bra023965.1-P	AT4G32040.1	15781858
AT1G06920.1	Bra006085.1-P	AT5G11060.1	15781858
AT1G06920.1	Bra009826.1-P	AT5G25220.1	15781858
AT1G06920.1	Bra025497.1-P	AT5G41410.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06241	Canola	mitochondrion	96.68	96.68
CDY09945	Canola	nucleus, plastid	94.35	94.35
CDY67505	Canola	nucleus, plastid	93.36	93.36
AT1G06920.1	Thale cress	mitochondrion, nucleus, plastid	71.43	68.25
Bra018316.1-P	Field mustard	nucleus	55.15	52.53
Bra022796.1-P	Field mustard	nucleus	52.49	51.3
Bra021632.1-P	Field mustard	nucleus	53.16	49.38
Bra024464.1-P	Field mustard	cytosol	9.97	34.48
Bra040948.1-P	Field mustard	nucleus	25.58	29.28
GSMUA_Achr3P09850_001	Banana	mitochondrion	29.24	27.76
Bra002657.1-P	Field mustard	nucleus	27.57	24.27
Bra005303.1-P	Field mustard	mitochondrion, plastid	14.29	23.12
Bra017266.1-P	Field mustard	nucleus	13.62	22.04
Bra020055.1-P	Field mustard	mitochondrion	14.29	20.87
Bra002252.1-P	Field mustard	mitochondrion	14.29	20.19
Bra020989.1-P	Field mustard	mitochondrion	19.93	18.69
Bra013354.1-P	Field mustard	mitochondrion	19.27	17.79
Bra012575.1-P	Field mustard	nucleus	20.27	16.49
Bra039604.1-P	Field mustard	nucleus	14.29	13.65

Protein Annotations

MapMan:15.5.37	EnsemblPlantsGene:Bra031546	EnsemblPlants:Bra031546.1	EnsemblPlants:Bra031546.1-P	InterPro:DNA_bnd_dom_ovate	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	GO:GO:2000652	InterPro:IPR006458	UniProt:M4ERW9
InterPro:Ovate	InterPro:Ovate_C	PFAM:PF04844	PFAM:PF13724	PFscan:PS51754	PANTHER:PTHR33057
PANTHER:PTHR33057:SF22	TIGRFAMs:TIGR01568	UniParc:UPI000254344B	SEG:seg	:	:

Description

AT1G06920 (E=3e-095) ATOFP4, OFP4 | OFP4 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 4)

Coordinates

chrA09:+:35892408..35893313

Molecular Weight (calculated)

34508.4 Da

IEP (calculated)

11.141

GRAVY (calculated)

-0.933

Length

301 amino acids

Sequence
(BLAST)

001: MRNYKFRFSA MIPSEWLHKL KNMTKPRKKH PRPSSCSLNT TKKTKASSES NKSLPHSSRT YFSSRSHTSL ESKILHNSPR NSLHVIESKR KTIYKPSPPP
101: SSSVSAGFNK KKINFPPNQD SSSSASSNVI DMNSRDFKKR MFKEMKVFDS TEKACPASNR TKTSRKPHHL SVKVNNKEKE EACRIKKNVS NGRRSSSNSP
201: RIKIKVNSPR VQVPARRSKS RSQNKQVLES FAVIKSSLDP KKDFRESMVE MIEENNIRAS QDLRELLACY LSLNPKEYHD LILKVFVQVW LEVINSKVAS
301: K

Best Arabidopsis Sequence Match ( AT1G06920.1 )
(BLAST)

001: MRNYKLRLSV MSPSEWFHKL KNMTKPRKKH SLPLYSINTT KKRKPSSESK SLPYSSTSYF FNRSRSRTSF ESRILQISPR NSLHNIQSKR KTVYKPSPPS
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK

Arabidopsis Description

OFP4Transcription repressor OFP4 [Source:UniProtKB/Swiss-Prot;Acc:F4HNU8]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.