Factsheet for Bra000638.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001976.1-P
Bra005703.1-P
Bra006085.1-P
Bra009618.1-P
Bra018316.1-P
Bra021632.1-P
Bra022796.1-P
Bra025497.1-P
Bra027006.1-P
Bra028883.1-P
Bra029455.1-P
Bra030218.1-P
Bra031546.1-P
Bra036636.1-P
Bra037861.1-P
Bra037942.1-P
Bra040948.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G08150.1	Bra031546.1-P	AT1G06920.1	15781858
AT4G08150.1	Bra027006.1-P	AT1G62990.1	15781858
AT4G08150.1	Bra036636.1-P	AT1G62990.1	15781858
AT4G08150.1	Bra001976.1-P	AT2G16400.1	15781858
AT4G08150.1	Bra030218.1-P	AT2G22680.1	21798944
AT4G08150.1	Bra018316.1-P	AT2G30400.1	15781858
AT4G08150.1	Bra021632.1-P	AT2G30400.1	15781858
AT4G08150.1	Bra022796.1-P	AT2G30400.1	15781858
AT4G08150.1	Bra037861.1-P	AT4G08520.1	21798944
AT4G08150.1	Bra029455.1-P	AT4G12450.1	21798944
AT4G08150.1	Bra040948.1-P	AT5G01840.1	15781858
AT4G08150.1	Bra005703.1-P	AT5G02030.1	12897247
AT4G08150.1	Bra009618.1-P	AT5G02030.1	12897247
AT4G08150.1	Bra028883.1-P	AT5G02030.1	12897247
AT4G08150.1	Bra005703.1-P	AT5G02030.1	15019989
AT4G08150.1	Bra009618.1-P	AT5G02030.1	15019989
AT4G08150.1	Bra028883.1-P	AT5G02030.1	15019989
AT4G08150.1	Bra005703.1-P	AT5G02030.1	15781858
AT4G08150.1	Bra009618.1-P	AT5G02030.1	15781858
AT4G08150.1	Bra028883.1-P	AT5G02030.1	15781858
AT4G08150.1	Bra006085.1-P	AT5G11060.1	15781858
AT4G08150.1	Bra025497.1-P	AT5G41410.1	11701881
AT4G08150.1	Bra025497.1-P	AT5G41410.1	15781858
AT4G08150.1	Bra025497.1-P	AT5G41410.1	17873098
AT4G08150.1	Bra037942.1-P	AT5G50100.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83145	Canola	nucleus	99.74	96.02
CDY34012	Canola	nucleus	47.8	95.85
CDY68624	Canola	nucleus	81.65	90.54
AT4G08150.1	Thale cress	nucleus	90.96	88.44
Os03t0673000-00	Rice	nucleus	16.8	84.42
GSMUA_Achr5P01960_001	Banana	nucleus	35.4	71.35
VIT_18s0001g08380.t01	Wine grape	nucleus	62.79	65.68
GSMUA_Achr7P08050_001	Banana	nucleus	44.19	64.29
GSMUA_Achr4P28270_001	Banana	nucleus	44.44	63.47
Solyc04g077210.2.1	Tomato	nucleus	58.14	63.38
PGSC0003DMT400012712	Potato	nucleus	58.14	62.5
KRH61471	Soybean	nucleus	56.85	60.94
GSMUA_Achr2P13200_001	Banana	nucleus	52.2	57.55
TraesCS2A01G267400.1	Wheat	nucleus	50.9	56.77
TraesCS2B01G268200.1	Wheat	nucleus	50.9	56.77
GSMUA_Achr10P...	Banana	nucleus	37.98	56.54
TraesCS2D01G256400.1	Wheat	nucleus	50.65	56.48
GSMUA_Achr4P03120_001	Banana	nucleus	42.12	56.21
Os07t0129700-01	Rice	nucleus	51.42	56.06
EER95833	Sorghum	nucleus	51.16	55.62
Zm00001d018742_P001	Maize	nucleus	50.39	55.56
GSMUA_Achr7P27540_001	Banana	nucleus	49.87	55.14
GSMUA_Achr3P26230_001	Banana	nucleus	45.22	54.35
HORVU2Hr1G061320.3	Barley	nucleus, plastid	49.87	53.91
Zm00001d007842_P002	Maize	nucleus	50.13	53.89
TraesCS5B01G410600.1	Wheat	nucleus	43.67	53.48
Os03t0727000-02	Rice	nucleus	49.61	53.19
GSMUA_Achr4P32230_001	Banana	nucleus	47.29	53.04
GSMUA_Achr6P04640_001	Banana	nucleus	48.58	52.66
TraesCS4D01G058000.1	Wheat	nucleus	48.58	51.93
TraesCS4A01G256700.1	Wheat	nucleus	48.58	51.93
Zm00001d033859_P002	Maize	nucleus	48.06	51.81
TraesCS4B01G057900.1	Wheat	nucleus	48.58	51.79
TraesCS5A01G405900.1	Wheat	nucleus	44.44	51.65
HORVU4Hr1G009730.1	Barley	nucleus	48.58	51.65
EER90950	Sorghum	nucleus	47.8	51.39
TraesCS5D01G415900.1	Wheat	nucleus	44.7	51.03
OQU90921	Sorghum	nucleus	43.15	47.85
TraesCS4A01G292200.1	Wheat	nucleus	37.73	45.77
EER91090	Sorghum	nucleus	39.02	45.21
TraesCS4B01G021900.2	Wheat	nucleus	37.73	44.92
HORVU4Hr1G003360.1	Barley	nucleus	36.95	44.55
Os03t0771500-01	Rice	nucleus	38.5	44.35
Zm00001d033861_P001	Maize	nucleus	41.09	44.17
OQU91064	Sorghum	nucleus	42.12	43.94
Bra016348.1-P	Field mustard	nucleus	35.14	43.31
Bra024591.1-P	Field mustard	nucleus	36.43	42.99
TraesCS4D01G019600.1	Wheat	nucleus	37.73	42.94
HORVU5Hr1G098570.6	Barley	plastid	44.44	42.36
Os03t0727200-00	Rice	nucleus	39.53	41.92
Bra027050.1-P	Field mustard	nucleus	40.57	41.1
Bra007920.1-P	Field mustard	nucleus	34.37	40.67
TraesCS4B01G022000.1	Wheat	nucleus	31.27	40.33
TraesCS4D01G019800.1	Wheat	nucleus	33.33	40.06
Zm00001d033404_P002	Maize	nucleus	38.24	39.89
TraesCS4D01G019900.1	Wheat	nucleus	33.07	39.26
TraesCS4A01G291900.1	Wheat	nucleus	32.3	37.99
TraesCS4A01G292100.1	Wheat	nucleus	32.3	37.88
Os03t0673500-00	Rice	nucleus	33.33	37.5
HORVU4Hr1G003410.3	Barley	nucleus	33.59	36.83
Zm00001d034212_P001	Maize	nucleus	44.19	35.33
Zm00001d013559_P001	Maize	cytosol, mitochondrion, nucleus	14.73	34.97
TraesCS4A01G292000.1	Wheat	cytosol, nucleus, plastid	12.66	32.24
TraesCS4A01G251800.1	Wheat	nucleus	13.18	30.72
Os03t0772100-00	Rice	vacuole	32.56	30.29
Bra024592.1-P	Field mustard	nucleus	16.28	29.72
Bra024593.1-P	Field mustard	nucleus	15.76	29.19
Bra036636.1-P	Field mustard	nucleus	21.19	27.89
Bra027006.1-P	Field mustard	nucleus	20.93	27.46
Bra011317.1-P	Field mustard	nucleus	23.0	23.8
Bra006085.1-P	Field mustard	nucleus	23.51	23.58
Bra023965.1-P	Field mustard	nucleus	23.26	23.5
Bra028554.1-P	Field mustard	nucleus	23.26	23.26
Bra009826.1-P	Field mustard	nucleus	22.48	21.01
Bra020491.1-P	Field mustard	nucleus	18.35	18.07

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.4	EnsemblPlantsGene:Bra000638	EnsemblPlants:Bra000638.1	EnsemblPlants:Bra000638.1-P	InterPro:ELK_dom
GO:GO:0001708	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010051	GO:GO:0010089
GO:GO:0030154	GO:GO:0043565	GO:GO:0045165	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_KN_domain
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR005539	InterPro:KNOX1	InterPro:KNOX2	UniProt:M4C8W0
PFAM:PF03789	PFAM:PF03790	PFAM:PF03791	PFAM:PF05920	ScanProsite:PS00027	PFscan:PS50071
PFscan:PS51213	PANTHER:PTHR11850	PANTHER:PTHR11850:SF203	SMART:SM00389	SMART:SM01188	SMART:SM01255
SMART:SM01256	SUPFAM:SSF46689	UniParc:UPI000254020D	SEG:seg	:	:

Description

AT4G08150 (E=9e-163) KNAT1, BP, BP1 | KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA); transcription factor

Coordinates

chrA03:-:12186043..12189723

Molecular Weight (calculated)

44673.1 Da

IEP (calculated)

6.555

GRAVY (calculated)

-1.055

Length

387 amino acids

Sequence
(BLAST)

001: MEEYQHESRS TPHRVSFLYS PISSSNKNDN TTTNNNNTNY GSGYNNTNNN NHQQHMLFPH MSSLLPQTTE NCFRSDHDQP TNASVKSEAS SSRINHYSML
101: MKAIHNTQEA NNNNNNNDME SMKAKIIAHP HYSTLLHAYL DCQKIGAPPE VVDKITAARQ EFEARQQRPT ASVTALSRDP ELDQFMEAYC DMLVKYREEL
201: TRPIEEAMEY IRRIESQISM LCQGPIHILN NPDGKSEGME SSDEEQDNNN SGGEAELPEI DPRAEDRELK NHLLKKYSGY LSSLKQELSK KKKKGKLPKE
301: ARQKLLTWWE LHYKWPYPSE SEKVALAEST GLDQKQINNW FINQRKRHWK PSEDMQFMVM DGLQHPHHAA LYMDGHYMGD GPYRLGP

Best Arabidopsis Sequence Match ( AT4G08150.1 )
(BLAST)

001: MEEYQHDNST TPQRVSFLYS PISSSNKNDN TSDTNNNNNN NNSSNYGPGY NNTNNNNHHH QHMLFPHMSS LLPQTTENCF RSDHDQPNNN NNPSVKSEAS
101: SSRINHYSML MRAIHNTQEA NNNNNDNVSD VEAMKAKIIA HPHYSTLLQA YLDCQKIGAP PDVVDRITAA RQDFEARQQR STPSVSASSR DPELDQFMEA
201: YCDMLVKYRE ELTRPIQEAM EFIRRIESQL SMLCQSPIHI LNNPDGKSDN MGSSDEEQEN NSGGETELPE IDPRAEDREL KNHLLKKYSG YLSSLKQELS
301: KKKKKGKLPK EARQKLLTWW ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLQHPHHA ALYMDGHYMG DGPYRLGP

Arabidopsis Description

KNAT1Homeobox protein knotted-1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P46639]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.