Factsheet for Bra018316.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000638.1-P
Bra006085.1-P
Bra009826.1-P
Bra011317.1-P
Bra023965.1-P
Bra027006.1-P
Bra036636.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30400.1	Bra027006.1-P	AT1G62990.1	15781858
AT2G30400.1	Bra036636.1-P	AT1G62990.1	15781858
AT2G30400.1	Bra000638.1-P	AT4G08150.1	15781858
AT2G30400.1	Bra011317.1-P	AT4G32040.1	15781858
AT2G30400.1	Bra023965.1-P	AT4G32040.1	15781858
AT2G30400.1	Bra006085.1-P	AT5G11060.1	15781858
AT2G30400.1	Bra009826.1-P	AT5G25220.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10735	Canola	nucleus	90.82	92.88
CDY02063	Canola	nucleus	91.14	92.6
AT2G30400.1	Thale cress	nucleus	76.27	75.31
Bra022796.1-P	Field mustard	nucleus	72.47	74.35
Bra021632.1-P	Field mustard	nucleus	75.95	74.07
Bra031546.1-P	Field mustard	mitochondrion, nucleus, plastid	52.53	55.15
Bra024464.1-P	Field mustard	cytosol	9.49	34.48
Bra040948.1-P	Field mustard	nucleus	27.85	33.46
Bra002657.1-P	Field mustard	nucleus	30.38	28.07
GSMUA_Achr3P09850_001	Banana	mitochondrion	27.22	27.13
Bra020055.1-P	Field mustard	mitochondrion	15.51	23.79
Bra002252.1-P	Field mustard	mitochondrion	15.51	23.0
Bra005303.1-P	Field mustard	mitochondrion, plastid	13.29	22.58
Bra017266.1-P	Field mustard	nucleus	12.66	21.51
Bra020989.1-P	Field mustard	mitochondrion	21.84	21.5
Bra013354.1-P	Field mustard	mitochondrion	20.57	19.94
Bra012575.1-P	Field mustard	nucleus	20.57	17.57
Bra039604.1-P	Field mustard	nucleus	14.87	14.92

Protein Annotations

MapMan:15.5.37	EnsemblPlantsGene:Bra018316	EnsemblPlants:Bra018316.1	EnsemblPlants:Bra018316.1-P	InterPro:DNA_bnd_dom_ovate	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	UniProt:M4DP75	InterPro:Ovate
InterPro:Ovate_C	PFAM:PF04844	PFAM:PF13724	PFscan:PS51754	PANTHER:PTHR33057	PANTHER:PTHR33057:SF38
TIGRFAMs:TIGR01568	UniParc:UPI0002547B9B	SEG:seg	:	:	:

Description

AT2G30400 (E=8e-116) ATOFP2, OFP2 | OFP2 (OVATE FAMILY PROTEIN 2)

Coordinates

chrA05:-:7399539..7400489

Molecular Weight (calculated)

36413.3 Da

IEP (calculated)

10.442

GRAVY (calculated)

-0.981

Length

316 amino acids

Sequence
(BLAST)

001: MGNHKFKFSD MIPNAWFHKL KDMTKPKNKP VSYSSSNTFN KKKLSSDSLP HKSSASHFSN SLVANSPHHN SPRNSTHRKR MSKRKTLYKP SLKPNTPPFA
101: SAGFNKSKMN GQDSSHCPFP ALERSPEYFV YSFYEEKDDE FVDHSNFKIK ENNKAFTKKA CPARNSIKKP LKPHLSVKIS KEKEEDEDDE CIAEKKYQKQ
201: VSSGRKSSAG INLRRVNSPR IQLSGTRRST SRSENKQAVL ESFAVMKSSV DPKKDFRESM VEMIEENNIR ASKDLEDLLA CYLSLNPKEY HDLIIQVFEQ
301: IWRQLTKTKL KKTLLM

Best Arabidopsis Sequence Match ( AT2G30400.1 )
(BLAST)

001: MGNYKFRISE MLPNAWFHKL KDVTKHSKPK NKASSSSSNT CSKKKPSSDS LPQHSYFSNS LVANNPPHHN SPRNSLHTKK MSKRKTLYKP SLKPLTPPPL
101: LVSASFNKSK INDQDSSYSL FPAIETSPES FVYSFYEEDD DDEFVEFSNF KINTKNKAFT KQKVKVIDSV EKACTASKPI KKPQKSHLSV KISRDEDDNE
201: YKAEKKYQRQ VSSGRKPSAG INLKRVNSPR IQLSGTRRST SRRSESKQDV LESFAVMKRS VDPKKDFRES MIEMIEENNI RASKDLEDLL ACYLTLNPKE
301: YHDLIIHVFE QIWLQLTKTK

Arabidopsis Description

OFP2Transcription repressor OFP2 [Source:UniProtKB/Swiss-Prot;Acc:O04351]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.