Factsheet for Bra011317.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001976.1-P
Bra002657.1-P
Bra005703.1-P
Bra009618.1-P
Bra011317.1-P
Bra018316.1-P
Bra021632.1-P
Bra022796.1-P
Bra023965.1-P
Bra025497.1-P
Bra027006.1-P
Bra028883.1-P
Bra031546.1-P
Bra036636.1-P
Bra040948.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32040.1	Bra031546.1-P	AT1G06920.1	15781858
AT4G32040.1	Bra027006.1-P	AT1G62990.1	15781858
AT4G32040.1	Bra036636.1-P	AT1G62990.1	15781858
AT4G32040.1	Bra001976.1-P	AT2G16400.1	15781858
AT4G32040.1	Bra018316.1-P	AT2G30400.1	15781858
AT4G32040.1	Bra021632.1-P	AT2G30400.1	15781858
AT4G32040.1	Bra022796.1-P	AT2G30400.1	15781858
AT4G32040.1	Bra011317.1-P	AT4G32040.1	15781858
AT4G32040.1	Bra023965.1-P	AT4G32040.1	15781858
AT4G32040.1	Bra040948.1-P	AT5G01840.1	15781858
AT4G32040.1	Bra005703.1-P	AT5G02030.1	15781858
AT4G32040.1	Bra009618.1-P	AT5G02030.1	15781858
AT4G32040.1	Bra028883.1-P	AT5G02030.1	15781858
AT4G32040.1	Bra025497.1-P	AT5G41410.1	11701881
AT4G32040.1	Bra025497.1-P	AT5G41410.1	17873098
AT4G32040.1	Bra002657.1-P	AT5G58360.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75215	Canola	nucleus	97.86	97.86
CDX68812	Canola	nucleus	97.33	97.33
AT4G32040.1	Thale cress	nucleus	89.3	87.21
Bra023965.1-P	Field mustard	nucleus	86.36	84.33
TraesCS5B01G454600.1	Wheat	nucleus	36.63	77.84
TraesCS6D01G134800.1	Wheat	nucleus	39.84	71.98
OQU84501	Sorghum	nucleus	51.6	63.07
TraesCS6A01G145500.1	Wheat	nucleus	50.8	62.09
TraesCS6B01G173900.1	Wheat	nucleus	49.47	62.08
TraesCS1B01G135600.1	Wheat	nucleus	45.99	61.21
TraesCS7D01G501000.1	Wheat	nucleus	50.53	61.16
HORVU6Hr1G028610.2	Barley	nucleus	50.53	61.16
Zm00001d053749_P002	Maize	nucleus	52.14	61.13
Zm00001d046568_P001	Maize	nucleus	51.6	61.08
Os06t0646600-01	Rice	nucleus	52.14	60.37
KXG20488	Sorghum	nucleus	51.34	60.19
Os02t0182800-01	Rice	nucleus	50.27	60.06
Zm00001d015549_P001	Maize	nucleus	51.6	59.38
Bra006085.1-P	Field mustard	nucleus	61.23	59.33
Bra028554.1-P	Field mustard	nucleus	61.23	59.17
Bra036636.1-P	Field mustard	nucleus	45.99	58.5
Bra027006.1-P	Field mustard	nucleus	45.99	58.31
TraesCS7B01G423100.2	Wheat	nucleus	49.73	55.52
HORVU7Hr1G114650.2	Barley	nucleus	47.59	55.11
Bra009826.1-P	Field mustard	nucleus	59.63	53.86
Bra020491.1-P	Field mustard	nucleus	52.67	50.13
TraesCS7A01G511800.2	Wheat	nucleus	49.73	46.5
Bra016348.1-P	Field mustard	nucleus	22.46	26.75
Bra024591.1-P	Field mustard	nucleus	21.66	24.7
Bra007920.1-P	Field mustard	nucleus	21.39	24.46
Bra000638.1-P	Field mustard	nucleus	23.8	23.0
Bra027050.1-P	Field mustard	nucleus	21.12	20.68
Bra024592.1-P	Field mustard	nucleus	9.63	16.98
Bra024593.1-P	Field mustard	nucleus	9.09	16.27

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.4	EnsemblPlantsGene:Bra011317	EnsemblPlants:Bra011317.1	EnsemblPlants:Bra011317.1-P	InterPro:ELK_dom
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356
InterPro:IPR005539	InterPro:KNOX1	InterPro:KNOX2	UniProt:M4D4B3	PFAM:PF03789	PFAM:PF03790
PFAM:PF03791	PFAM:PF05920	PFscan:PS50071	PFscan:PS51213	PANTHER:PTHR11850	PANTHER:PTHR11850:SF95
SMART:SM00389	SMART:SM01188	SMART:SM01255	SMART:SM01256	SUPFAM:SSF46689	UniParc:UPI0002546624
SEG:seg	:	:	:	:	:

Description

AT4G32040 (E=4e-180) KNAT5 | KNAT5 (KNOTTED1-LIKE HOMEOBOX GENE 5); transcription activator/ transcription factor

Coordinates

chrA01:-:2752087..2753975

Molecular Weight (calculated)

41913.2 Da

IEP (calculated)

6.118

GRAVY (calculated)

-0.646

Length

374 amino acids

Sequence
(BLAST)

001: MSFTSSHLLP PQEDLPLRHF SDQSHQHPQP HFSETPSLLT ATFLNLPPAA ATADSDFAPP NRGGDSSSAA AATNRRWLSF DSSEIQNTGE GPPEVIDGVN
101: ADGGGEDWKS ASCKAAIVRH PMFEQLLAAH VACLRVATPV DQIPRIDAQL SELHTVAAKY STLGVVMDNK ELDHFMSHYV VLLCSFKEQL QHHVCVHAME
201: AITACWEIEQ SLQSITGVSP SENNGKTMSD DEDDNQVESE VNMFDGSLDG SDCMMGFGPL VPTERERSLL ERVKKELKHE LKQGFKEKIV DIREEIMRKR
301: RAGKLPGDTT SVLKEWWRTH AKWPYPTEED KAKLVEETGL QLKQINNWFI NQRKRNWNSN SSTSSTPSKN KRKR

Best Arabidopsis Sequence Match ( AT4G32040.1 )
(BLAST)

001: MSFNSSHLLP PQEDLPLRHF TDQSQQPPPQ RHFSETPSLV TASFLNLPTT LTTADSDLAP PHRNGDNSVA DTNPRWLSFH SEMQNTGEVR SEVIDGVNAD
101: GETILGVVGG EDWRSASYKA AILRHPMYEQ LLAAHVACLR VATPVDQIPR IDAQLSQLHT VAAKYSTLGV VVDNKELDHF MSHYVVLLCS FKEQLQHHVC
201: VHAMEAITAC WEIEQSLQSL TGVSPSESNG KTMSDDEDDN QVESEVNMFD GSLDGSDCLM GFGPLVPTER ERSLMERVKK ELKHELKQGF KEKIVDIREE
301: IMRKRRAGKL PGDTTSVLKE WWRTHSKWPY PTEEDKAKLV QETGLQLKQI NNWFINQRKR NWNSNSSTSS TLTKNKRKRT GKS

Arabidopsis Description

KNAT5KNAT5 [Source:UniProtKB/TrEMBL;Acc:A0A178V1Z3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.