Factsheet for Bra007920.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03742	Canola	nucleus	99.69	99.69
AT1G70510.2	Thale cress	nucleus	81.65	85.03
Bra024591.1-P	Field mustard	nucleus	76.45	76.22
Bra016348.1-P	Field mustard	nucleus	71.25	74.2
KRG99390	Soybean	nucleus	29.05	72.52
Bra024593.1-P	Field mustard	nucleus	43.12	67.46
Bra024592.1-P	Field mustard	nucleus	43.73	67.45
KRH74562	Soybean	nucleus	62.69	66.34
KRH69600	Soybean	nucleus	62.08	65.91
KRH45633	Soybean	nucleus	64.22	65.42
VIT_01s0127g00210.t01	Wine grape	nucleus	63.61	65.41
Solyc05g005090.2.1	Tomato	nucleus	56.57	57.81
KRG99387	Soybean	nucleus	32.72	55.73
PGSC0003DMT400035095	Potato	nucleus	57.49	54.65
Bra000638.1-P	Field mustard	nucleus	40.67	34.37
Bra027050.1-P	Field mustard	nucleus	39.76	34.03
Bra036636.1-P	Field mustard	nucleus	25.08	27.89
Bra027006.1-P	Field mustard	nucleus	24.77	27.46
Bra028554.1-P	Field mustard	nucleus	25.99	21.96
Bra006085.1-P	Field mustard	nucleus	25.69	21.76
Bra023965.1-P	Field mustard	nucleus	25.08	21.41
Bra011317.1-P	Field mustard	nucleus	24.46	21.39
Bra009826.1-P	Field mustard	nucleus	23.55	18.6
Bra020491.1-P	Field mustard	nucleus	19.27	16.03

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.4	EnsemblPlantsGene:Bra007920	EnsemblPlants:Bra007920.1	EnsemblPlants:Bra007920.1-P	InterPro:ELK_dom
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_KN_domain
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR005539	InterPro:KNOX1	InterPro:KNOX2	UniProt:M4CUM5
PFAM:PF03789	PFAM:PF03790	PFAM:PF03791	PFAM:PF05920	ScanProsite:PS00027	PFscan:PS50071
PFscan:PS51213	PANTHER:PTHR11850	PANTHER:PTHR11850:SF99	SMART:SM00389	SMART:SM01188	SMART:SM01255
SMART:SM01256	SUPFAM:SSF46689	UniParc:UPI0002546A4F	SEG:seg	:	:

Description

AT1G70510 (E=5e-127) KNAT2, ATK1 | KNAT2 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA 2); transcription factor

Coordinates

chrA02:+:11856853..11862094

Molecular Weight (calculated)

36966.2 Da

IEP (calculated)

4.662

GRAVY (calculated)

-0.615

Length

327 amino acids

Sequence
(BLAST)

001: MDRMCGFRSA GDYSEKAELM MSSSESLMSL SDYHNLICSS AGENHVFGSN ELFSAAASAL SSEVSIAPPA RRADQDNPSL GLIKSKIASH PLYPRLLQTY
101: IDCQKVGAPL EIACVLEEIQ RENDVYKRDV APLSCFGADP ELDEFMETYC DILVKYKSDL ARPFDEATTF LNKIETQLQD LCTGPASARG LSVSDDGAVS
201: SDEELRESDD VATQDSQQRS NDRELKDQLL RKFGSHISSL KLEFSKKKKK GKLPREARQA LLDWWNVHYK WPYPTEADKI ALAEETGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS ETFFTEE

Best Arabidopsis Sequence Match ( AT1G70510.1 )
(BLAST)

001: MDRMCGFRST EDYSEKATLM MPSDYQSLIC STTGDNQRLF GSDELATALS SELLPRIRKA EDNFSLSVIK SKIASHPLYP RLLQTYIDCQ KVGAPMEIAC
101: ILEEIQRENH VYKRDVAPLS CFGADPELDE FMETYCDILV KYKTDLARPF DEATTFINKI EMQLQNLCTG PASATALSDD GAVSSDEELR EDDDIAADDS
201: QQRSNDRDLK DQLLRKFGSH ISSLKLEFSK KKKKGKLPRE ARQALLDWWN VHNKWPYPTE GDKISLAEET GLDQKQINNW FINQRKRHWK PSENMPFDMM
301: DDSNETFFTE

Arabidopsis Description

KNAT2KNOTTED-like from Arabidopsis thaliana 2 [Source:TAIR;Acc:AT1G70510]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.