Factsheet for Bra024591.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024593.1-P	Field mustard	nucleus	60.67	95.22
Bra024592.1-P	Field mustard	nucleus	60.98	94.34
Bra016348.1-P	Field mustard	nucleus	85.67	89.49
AT1G23380.2	Thale cress	nucleus	89.33	89.06
Bra007920.1-P	Field mustard	nucleus	76.22	76.45
KRG99390	Soybean	nucleus	29.57	74.05
CDY69524	Canola	nucleus	45.73	73.53
CDY70923	Canola	nucleus	45.12	72.2
KRH74562	Soybean	nucleus	66.16	70.23
VIT_01s0127g00210.t01	Wine grape	nucleus	67.68	69.81
KRH69600	Soybean	nucleus	64.94	69.16
KRH45633	Soybean	nucleus	67.38	68.85
KRG99387	Soybean	nucleus	35.37	60.42
Solyc05g005090.2.1	Tomato	nucleus	56.71	58.12
PGSC0003DMT400035095	Potato	nucleus	58.84	56.1
Bra000638.1-P	Field mustard	nucleus	42.99	36.43
Bra027050.1-P	Field mustard	nucleus	40.24	34.55
Bra036636.1-P	Field mustard	nucleus	25.91	28.91
Bra027006.1-P	Field mustard	nucleus	25.61	28.47
Bra006085.1-P	Field mustard	nucleus	26.52	22.54
Bra028554.1-P	Field mustard	nucleus	26.22	22.22
Bra011317.1-P	Field mustard	nucleus	24.7	21.66
Bra023965.1-P	Field mustard	nucleus	24.7	21.15
Bra009826.1-P	Field mustard	nucleus	25.0	19.81
Bra020491.1-P	Field mustard	nucleus	21.65	18.07

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.4	EnsemblPlantsGene:Bra024591	EnsemblPlants:Bra024591.1	EnsemblPlants:Bra024591.1-P	InterPro:ELK_dom
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_KN_domain
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR005539	InterPro:KNOX1	InterPro:KNOX2	UniProt:M4E736
PFAM:PF03789	PFAM:PF03790	PFAM:PF03791	PFAM:PF05920	ScanProsite:PS00027	PFscan:PS50071
PFscan:PS51213	PANTHER:PTHR11850	PANTHER:PTHR11850:SF99	SMART:SM00389	SMART:SM01188	SMART:SM01255
SMART:SM01256	SUPFAM:SSF46689	UniParc:UPI0002542990	SEG:seg	:	:

Description

AT1G23380 (E=6e-147) KNAT6, KNAT6L, KNAT6S | KNAT6; DNA binding / transcription activator/ transcription factor

Coordinates

chrA09:+:24185418..24193617

Molecular Weight (calculated)

36823.4 Da

IEP (calculated)

4.648

GRAVY (calculated)

-0.537

Length

328 amino acids

Sequence
(BLAST)

001: MDGMYGFHPT DGDYSDKAVL MMSPDNLMFP SDYQTLLCSS AGDNRVSDVF GSDELLSAAA SALSSEAASI APEIPRNDDK VSLGVIKGKI ACHPLYPRLL
101: QAYIDCQKVG APPEIACLLE EIQRESHVHK QNVVPLSSSF GADPELDEFM ETYCDILVKY KSDLARPFDE ATTFLNKIEM QLRNLCTGVE SDRGLSEDGA
201: VSSDEELNGG DEILQDGKQI CEDRDLKDRL LRKFGSRISS LKLEFSKKKK KGKLPKEARQ ALLDWWNVHY KWPYPTEGDK IALADATGLD QKQINNWFIN
301: QRKRHWKPSE NMPFAMMDDS SGSFFTEE

Best Arabidopsis Sequence Match ( AT1G23380.1 )
(BLAST)

001: MDGMYNFHSA GDYSDKSVLM MSPESLMFPS DYQALLCSSA GENRVSDVFG SDELLSVAVS ALSSEAASIA PEIRRNDDNV SLTVIKAKIA CHPSYPRLLQ
101: AYIDCQKVGA PPEIACLLEE IQRESDVYKQ EVVPSSCFGA DPELDEFMET YCDILVKYKS DLARPFDEAT CFLNKIEMQL RNLCTGVESA RGVSEDGVIS
201: SDEELSGGDH EVAEDGRQRC EDRDLKDRLL RKFGSRISTL KLEFSKKKKK GKLPREARQA LLDWWNLHYK WPYPTEGDKI ALADATGLDQ KQINNWFINQ
301: RKRHWKPSEN MPFAMMDDSS GSFFTEE

Arabidopsis Description

KNAT6KNOTTED1-like homeobox gene 6 [Source:TAIR;Acc:AT1G23380]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.